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Report for CCDS31370.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31370.1 Public Homo sapiens 11 OR52J3 24 110 108 CCDS HistoryNCBI Gene:119679Re-query CCDS DB by CCDS ID:31370.1Re-query CCDS DB by GeneID:119679See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31370.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380370.1 ENSP00000369728.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000380370.1Link to Ensembl Protein Viewer:ENSP00000369728.1Re-query CCDS DB by Nucleotide ID:ENST00000380370Re-query CCDS DB by Protein ID:ENSP00000369728
Original member Current member NCBI NM_001001916.2 NP_001001916.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001916.2Link to Protein Sequence:NP_001001916.2Re-query CCDS DB by Nucleotide ID:NM_001001916Re-query CCDS DB by Protein ID:NP_001001916Link to BLAST:NP_001001916.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001916.2 311 Q8NH60 311 100% 0 0

Chromosomal Locations for CCDS 31370.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 5046526 5047461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGTTTTATCACAACAAGAGCATATTTCACCCAGTCACATTTTTCCTCATTGGAATCCCAGGTCTGGAAG
ACTTCCACATGTGGATCTCCGGGCCTTTCTGCTCTGTTTACCTTGTGGCTTTGCTGGGCAATGCCACCAT
TCTGCTAGTCATCAAGGTAGAACAGACTCTCCGGGAGCCCATGTTCTACTTCCTGGCCATTCTTTCCACT
ATTGATTTGGCCCTTTCTACAACCTCTGTGCCTCGCATGCTGGGTATCTTCTGGTTTGATGCTCACGAGA
TTAACTATGGAGCTTGTGTGGCCCAGATGTTTCTGATCCATGCCTTCACTGGCATGGAGGCTGAGGTCTT
ACTGGCTATGGCTTTTGACCGTTATGTGGCCGTCTGTGCTCCACTACATTACGCAACCATCTTGACATCC
CAAGTGTTGGTGGGCATTAGCATGTGCATTGTAATTCGTCCCGTTTTACTTACACTTCCCATGGTCTATC
TTATCTACCGCCTACCCTTTTGTCAGGCTCACATAATAGCCCATTCCTACTGTGAGCACATGGGCATTGC
AAAATTGTCCTGTGGAAACATTCGTATCAATGGTATCTATGGGCTTTTTGTAGTTTCTTTCTTTGTTCTG
AACCTGGTGCTCATTGGCATCTCGTATGTTTACATTCTCCGTGCTGTCTTCCGCCTCCCATCACATGATG
CTCAGCTAAAAGCCCTAAGCACGTGTGGCGCTCATGTTGGAGTCATCTGTGTTTTCTATATCCCTTCAGT
CTTCTCTTTCCTTACTCATCGATTTGGACACCAAATACCAGGTTACATTCACATTCTTGTTGCCAATCTC
TATTTGATTATCCCACCCTCTCTCAACCCCATCATTTATGGGGTGAGGACCAAACAGATTCGAGAACGAG
TGCTCTATGTTTTTACTAAAAAATAA

Translation (311 aa):
MFYHNKSIFHPVTFFLIGIPGLEDFHMWISGPFCSVYLVALLGNATILLVIKVEQTLREPMFYFLAILST
IDLALSTTSVPRMLGIFWFDAHEINYGACVAQMFLIHAFTGMEAEVLLAMAFDRYVAVCAPLHYATILTS
QVLVGISMCIVIRPVLLTLPMVYLIYRLPFCQAHIIAHSYCEHMGIAKLSCGNIRINGIYGLFVVSFFVL
NLVLIGISYVYILRAVFRLPSHDAQLKALSTCGAHVGVICVFYIPSVFSFLTHRFGHQIPGYIHILVANL
YLIIPPSLNPIIYGVRTKQIRERVLYVFTKK


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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