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Report for CCDS3057.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3057.1 Public Homo sapiens 3 H1-10 24 110 108 CCDS HistoryNCBI Gene:8971Re-query CCDS DB by CCDS ID:3057.1Re-query CCDS DB by GeneID:8971See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3057.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000333762.6 ENSP00000329662.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000333762.6Link to Ensembl Protein Viewer:ENSP00000329662.4Re-query CCDS DB by Nucleotide ID:ENST00000333762Re-query CCDS DB by Protein ID:ENSP00000329662
Original member Current member NCBI NM_006026.4 NP_006017.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006026.4Link to Protein Sequence:NP_006017.1Re-query CCDS DB by Nucleotide ID:NM_006026Re-query CCDS DB by Protein ID:NP_006017Link to BLAST:NP_006017.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006017.1 213 Q92522 213 100% 0 0

Chromosomal Locations for CCDS 3057.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 129315261 129315902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (642 nt):
ATGTCCGTGGAGCTCGAGGAGGCCCTGCCAGTGACGACCGCCGAGGGAATGGCCAAGAAGGTGACCAAGG
CTGGCGGCTCGGCGGCGTTGTCCCCATCTAAGAAGAGGAAGAATAGCAAGAAGAAGAACCAGCCGGGCAA
GTACAGCCAGCTGGTGGTGGAGACCATCCGTAGGCTGGGCGAGCGCAACGGCTCGTCGCTGGCCAAGATC
TACACCGAGGCCAAGAAGGTTCCGTGGTTCGACCAGCAGAATGGGCGCACCTACCTCAAGTACTCGATCA
AGGCGCTGGTGCAGAACGACACGCTTCTGCAGGTGAAGGGCACCGGCGCCAACGGTTCCTTCAAGCTCAA
CCGCAAGAAGCTGGAGGGCGGCGGGGAGCGGCGCGGAGCCCCGGCGGCCGCCACCGCCCCGGCCCCCACC
GCGCACAAAGCGAAGAAGGCAGCCCCGGGCGCGGCCGGCTCCCGGCGCGCGGACAAGAAGCCCGCCAGGG
GCCAGAAGCCGGAGCAGCGCTCGCACAAGAAGGGCGCTGGCGCCAAGAAGGACAAAGGCGGCAAGGCCAA
GAAGACGGCGGCCGCCGGGGGCAAGAAGGTGAAGAAGGCGGCCAAGCCCAGCGTCCCCAAAGTGCCCAAG
GGCCGCAAGTGA

Translation (213 aa):
MSVELEEALPVTTAEGMAKKVTKAGGSAALSPSKKRKNSKKKNQPGKYSQLVVETIRRLGERNGSSLAKI
YTEAKKVPWFDQQNGRTYLKYSIKALVQNDTLLQVKGTGANGSFKLNRKKLEGGGERRGAPAAATAPAPT
AHKAKKAAPGAAGSRRADKKPARGQKPEQRSHKKGAGAKKDKGGKAKKTAAAGGKKVKKAAKPSVPKVPK
GRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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