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Report for CCDS29835.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29835.1 Public Mus musculus 19 Entpd7 23 108 98 CCDS HistoryNCBI Gene:93685Re-query CCDS DB by CCDS ID:29835.1Re-query CCDS DB by GeneID:93685See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29835.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000081079.5 ENSMUSP00000079864.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000081079.5Link to Ensembl Protein Viewer:ENSMUSP00000079864.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000081079Re-query CCDS DB by Protein ID:ENSMUSP00000079864
Original member Current member NCBI NM_053103.5 NP_444333.3 Accepted alive Link to Nucleotide Sequence:NM_053103.5Link to Protein Sequence:NP_444333.3Re-query CCDS DB by Nucleotide ID:NM_053103Re-query CCDS DB by Protein ID:NP_444333Link to BLAST:NP_444333.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_444333.3 606 Q3TCT4-1 606 100% 0 0

Chromosomal Locations for CCDS 29835.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 43690274 43690281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43691018 43691200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43704199 43704404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43704880 43705030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43711735 43711838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43716274 43716330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43717450 43717583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43721749 43721915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43725214 43725538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43726843 43726928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43727990 43728151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43729698 43729935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1821 nt):
ATGGCTAGGATCAGTTTTTCCTACCTCTGCCCAGCCTCCTGGTACTTCACTGTGCCCACAGTGAGCCCGT
TTCTCCGTCAGCGGGTGGCATTCCTGGGACTCTTCTTTATACCCTGTGTCCTTTTACTTCTTTTAATCAT
GGATTTACGACACTGGGCCACTTCGTTACCACGGGACAGGCAGTATGAGAGGTATTTGGCTCGGGTAGGA
GACCTGGAAGCCACCAACACGGAAGACCCAAATCTGAATTATGGACTCGTGGTGGACTGTGGTAGCAGCG
GCTCCCGGATTTTTGTTTACTTCTGGCCAAGGCATAATGGGAACCCCCATGACTTGCTGGACATCAAACA
GATGAGAGACCGGAACAGCCAGCCCGTGGTTAAGAAAATAAAGCCAGGGATCTCCGCAATGGCAGACACT
CCGGAACATGCTAGCGATTACCTTCGACCTCTGCTGAGCTTCGCTGCTGCTCATGTGCCCGTGAAGAAGC
ACAGGGAGACGCCCCTTTACATCCTCTGCACTGCGGGCATGAGGCTGCTCCCTGAGAGGCAACAGTTGGC
TATCTTGGCAGATTTAGTGAAAGATTTGCCGTTGGAGTTTGACTTCCTCTTTTCACAGTCTCAGGCCGAA
GTGATCTCTGGGAAACAGGAAGGAGTTTATGCATGGATCGGAATCAACTTTGTTCTGGGAAGATTTGACC
ATGAAGATGAGTCAGACTCGGACACCTCTGTGGACTCAGCAGCAGGCCGCAGGAGGACAGTGGGAATCCT
GGACATGGGAGGAGCCTCTCTCCAAATTGCCTACGAAGTTCCTACCTCAGCCTCCGACCTTCCTCCCAAA
CAGGAAGAAGCTGCCAAGATCCTGCTGGCCGAGTTCAACCTGGGCTGTGACGTGCAGCACACGGAGCACG
TGTACAGGGTTTATGTCACCACCTTCCTGGGCTTTGGGGGCAACTTTGCCCGGCAGCGCTATGAAGATCT
CGTGCTGAATGAAACGCTTAACAAAAACAGACTGCTGGGCCAGAAGACAGGCCTGAGTCCTGACAATCCC
TTTCTGGACCCCTGCCTGCCTGTGGGACTCACAGATATGGTGAAGAGGAACAACCAGGTCCTTCACTTCC
GAGGAAAGGGAGACTGGGCCAGTTGTCGGACATTGCTGAGCCCCCTGCTGGCCCGCTCCAACACCAGCCA
GGCCTCACTGAACGGTATTTACCAGTCTCCAATCGACTTCAACAACAGCGAGTTCTATGGCTTCTCAGAG
TTCTTCTACTGCACCGAAGATGTGCTGCGCATCGGTGGCCACTACCACGGGCCCACATTTGCCAAGGCTG
CTCAGGATTACTGTGGCATGGCGTGGCCGGTGCTAGCCCAGAGATTCAAGAACGGCCTCTTTTCTTCACA
CGCAGACGAGCATCGACTCAAGTATCAGTGTTTTAAGTCCGCTTGGATGTACGAAGTCCTGCACGAGGGG
TTCCACTTCCCCTACGACTACCCAAACCTGCAGACAGCGCAGCTGGTGTATGACCGAGAGGTGCAGTGGA
CGCTGGGAGCAATTCTGTATAAAACCCGATTCCTGCCTCTCAGGGACCTTCGGCAGGGACAGGGAGGAGT
CCGGCCAGCCCACGGCAGCTGGCTCCGCCTTTCCTTTGTCTACAACCACTATCTCTTCTTTGCTTGTACC
CTGGTGGTGCTTCTGGCCATCGTCCTGTACCTTCTGCGCATCCACAGAATTCACCGCAGACAAACCCGAG
CCTCGGCTCCTCTGGACCTGCTGTGGATCGAGCAAGTGGTGCCGATGATTGGGGTCCAGGTGGGGCCGTG
A

Translation (606 aa):
MARISFSYLCPASWYFTVPTVSPFLRQRVAFLGLFFIPCVLLLLLIMDLRHWATSLPRDRQYERYLARVG
DLEATNTEDPNLNYGLVVDCGSSGSRIFVYFWPRHNGNPHDLLDIKQMRDRNSQPVVKKIKPGISAMADT
PEHASDYLRPLLSFAAAHVPVKKHRETPLYILCTAGMRLLPERQQLAILADLVKDLPLEFDFLFSQSQAE
VISGKQEGVYAWIGINFVLGRFDHEDESDSDTSVDSAAGRRRTVGILDMGGASLQIAYEVPTSASDLPPK
QEEAAKILLAEFNLGCDVQHTEHVYRVYVTTFLGFGGNFARQRYEDLVLNETLNKNRLLGQKTGLSPDNP
FLDPCLPVGLTDMVKRNNQVLHFRGKGDWASCRTLLSPLLARSNTSQASLNGIYQSPIDFNNSEFYGFSE
FFYCTEDVLRIGGHYHGPTFAKAAQDYCGMAWPVLAQRFKNGLFSSHADEHRLKYQCFKSAWMYEVLHEG
FHFPYDYPNLQTAQLVYDREVQWTLGAILYKTRFLPLRDLRQGQGGVRPAHGSWLRLSFVYNHYLFFACT
LVVLLAIVLYLLRIHRIHRRQTRASAPLDLLWIEQVVPMIGVQVGP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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