NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS29656.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29656.1 Public Mus musculus 19 Or5b112 23 108 98 CCDS HistoryNCBI Gene:258689Re-query CCDS DB by CCDS ID:29656.1Re-query CCDS DB by GeneID:258689See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 29656.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000075868.1 ENSMUSP00000075265.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000075868.1Link to Ensembl Protein Viewer:ENSMUSP00000075265.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000075868Re-query CCDS DB by Protein ID:ENSMUSP00000075265
Original member Current member EBI ENSMUST00000207124.2 ENSMUSP00000147188.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000207124.2Link to Ensembl Protein Viewer:ENSMUSP00000147188.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000207124Re-query CCDS DB by Protein ID:ENSMUSP00000147188
Original member Current member NCBI NM_146694.1 NP_666905.1 Accepted alive Link to Nucleotide Sequence:NM_146694.1Link to Protein Sequence:NP_666905.1Re-query CCDS DB by Nucleotide ID:NM_146694Re-query CCDS DB by Protein ID:NP_666905Link to BLAST:NP_666905.1

Chromosomal Locations for CCDS 29656.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 13341760 13342692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGACATCATTGAACAACTTGACAGAAGTGACACACTTTCTCCTGCTGGGACTCACTGATGATCCAGGCC
TGCAACTTCCCCTTTTCATCATTTTTCTTCTCATCTACATCATTACCCTGGTAGGGAACCTGGGGATGAT
CCTGTTGATTCTCTTGGACTCTCGGCTCCATATCCCCATGTACTTTTTCCTTGCTAACTTGTCCCTGGTG
GATGTTATTTACTCTTCAGCGGTCACACCAAAAGTCATGGCTGGTCTCATAATAGGAGATAATCTCATTT
CTTACAATGAGTGTGCAGCTCAGATGTTCTTTTTTGCAGCCTTTGCTACTGTTGAAAATTATCTGTTGAC
TTCAATGGCCTGTGATCGCTATGCAGCAGTGTGTAAACCCCTATACTATGCTACCACCATGACTCCAAGT
GTATGTATGTGTTTCATCATGGGCTGCTATGCTCTTGGGTTCTTAAATGCCTCAGTTTATCTTGGAAATA
CATTCAGTCTTTCTTTCTGTAAATCTAATGTGGTTCATCATTTTTTCTGTGATATGCCAGCAATCATGGC
TCTCTCTTGCTCTGATAGACATGTTAATGAACTGGTACTTATTTATCAAGCCAGTTTTATTATCTTCTTT
GCTCTCATAATAATATTAATATCATATATTATAATTTTTATCACAATCTTAAAGATGCACTCAGAAGCAG
GAGTTCAGAAGGCTCTTTCCACTTGTGCTTCCCACTTTACTGCTGTTTTTATTTTCTATGGAACAACAAT
CTTCATGTATTTGCAGCCAAGCTCTAGACATGCAATGGACACGGACAAAATTGTGTCTGTCTTCTACACC
ATGGTCATTCCCATGCTGAACCCTTTAGTTTACAGCCTGAGAAATAAAGAAGTAAAGAGTGCATTCATGA
AAGTAGTTTTGAAAGAAAAATAA

Translation (310 aa):
MTSLNNLTEVTHFLLLGLTDDPGLQLPLFIIFLLIYIITLVGNLGMILLILLDSRLHIPMYFFLANLSLV
DVIYSSAVTPKVMAGLIIGDNLISYNECAAQMFFFAAFATVENYLLTSMACDRYAAVCKPLYYATTMTPS
VCMCFIMGCYALGFLNASVYLGNTFSLSFCKSNVVHHFFCDMPAIMALSCSDRHVNELVLIYQASFIIFF
ALIIILISYIIIFITILKMHSEAGVQKALSTCASHFTAVFIFYGTTIFMYLQPSSRHAMDTDKIVSVFYT
MVIPMLNPLVYSLRNKEVKSAFMKVVLKEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH