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Report for CCDS26524.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26524.1 Public Mus musculus 13 Drd1 23 108 98 CCDS HistoryNCBI Gene:13488Re-query CCDS DB by CCDS ID:26524.1Re-query CCDS DB by GeneID:13488See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 26524.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021932.5 ENSMUSP00000021932.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021932.5Link to Ensembl Protein Viewer:ENSMUSP00000021932.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000021932Re-query CCDS DB by Protein ID:ENSMUSP00000021932
Original member Current member NCBI NM_001291801.1 NP_001278730.1 Accepted alive Link to Nucleotide Sequence:NM_001291801.1Link to Protein Sequence:NP_001278730.1Re-query CCDS DB by Nucleotide ID:NM_001291801Re-query CCDS DB by Protein ID:NP_001278730Link to BLAST:NP_001278730.1
Original member Current member NCBI NM_010076.3 NP_034206.1 Accepted alive Link to Nucleotide Sequence:NM_010076.3Link to Protein Sequence:NP_034206.1Re-query CCDS DB by Nucleotide ID:NM_010076Re-query CCDS DB by Protein ID:NP_034206Link to BLAST:NP_034206.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001278730.1 446 Q61616 446 100% 0 0
NP_034206.1 446 Q61616 446 100% 0 0

Chromosomal Locations for CCDS 26524.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 54052853 54054193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1341 nt):
ATGGCTCCTAACACTTCTACCATGGATGAGACTGGCCTGCCAGTGGAGAGGGACTTCTCCTTTCGCATCC
TCACAGCCTGTTTTCTGTCCCTGCTTATCCTGTCCACTCTCTTAGGGAATACCCTTGTCTGTGCCGCTGT
CATCAGGTTTCGACACCTGCGGTCCAAGGTGACCAACTTCTTTGTCATCTCTTTAGCTGTGTCAGATCTC
TTGGTGGCTGTCTTGGTCATGCCCTGGAAAGCTGTGGCTGAGATTGCTGGCTTTTGGCCCTTTGGGTCCT
TTTGTAACATTTGGGTAGCCTTTGACATCATGTGCTCCACGGCATCCATCCTTAACCTCTGTGTGATCAG
CGTGGACAGGTATTGGGCTATCTCCAGCCCTTTCCAGTATGAGAGGAAGATGACTCCGAAGGCAGCCTTC
ATCCTGATTAGCGTAGCATGGACTTTGTCTGTTCTCATATCCTTCATTCCAGTGCAGCTAAGCTGGCACA
AGGCAAAACCTACATGGCCCTTGGATGGCAATTTTACTTCCCTGGAAGATGCCGAGGATGACAACTGTGA
CACGAGGTTGAGCAGGACATACGCCATTTCATCCTCCCTCATAAGCTTTTACATCCCCGTAGCCATTATG
ATCGTCACTTACACCAGTATCTACAGGATTGCCCAGAAGCAAATCCGGCGCATCTCAGCTTTGGAGAGGG
CAGCAGTCCATGCCAAGAACTGCCAGACCACCACAGGTAATGGAAACCCTGTCGAATGCTCTCAATCAGA
AAGTTCCTTTAAGATGTCCTTTAAGAGGGAGACTAAAGTCCTGAAGACACTGTCTGTGATCATGGGGGTA
TTCGTGTGCTGCTGGCTCCCTTTCTTCATTTCGAACTGTATGGTGCCCTTCTGTGGCTCTGAGGAGACCC
AGCCATTCTGCATTGATTCCATCACCTTCGATGTATTTGTGTGGTTTGGCTGGGCGAATTCCTCCCTGAA
CCCCATTATTTATGCTTTTAATGCCGATTTTCAGAAGGCATTCTCGACCCTCTTAGGATGCTATAGACTC
TGCCCTACAACGAATAATGCCATAGAGACTGTAAGCATCAACAACAACGGGGCTGTGATGTTTTCCAGCC
ACCATGAGCCCCGAGGCTCCATCTCCAAGGACTGTAATCTGGTTTACCTGATCCCTCATGCTGTGGGCTC
CTCTGAGGACCTGAAGAGGGAGGAGGCCGGTGGCATACCTAAGCCACTGGAGAAGCTGTCCCCGGCCTTA
TCGGTCATATTGGACTATGACACCGATGTCTCTCTAGAAAAGATCCAACCCGTTACCCACAGCGGACAGC
ATTCAACCTGA

Translation (446 aa):
MAPNTSTMDETGLPVERDFSFRILTACFLSLLILSTLLGNTLVCAAVIRFRHLRSKVTNFFVISLAVSDL
LVAVLVMPWKAVAEIAGFWPFGSFCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFQYERKMTPKAAF
ILISVAWTLSVLISFIPVQLSWHKAKPTWPLDGNFTSLEDAEDDNCDTRLSRTYAISSSLISFYIPVAIM
IVTYTSIYRIAQKQIRRISALERAAVHAKNCQTTTGNGNPVECSQSESSFKMSFKRETKVLKTLSVIMGV
FVCCWLPFFISNCMVPFCGSEETQPFCIDSITFDVFVWFGWANSSLNPIIYAFNADFQKAFSTLLGCYRL
CPTTNNAIETVSINNNGAVMFSSHHEPRGSISKDCNLVYLIPHAVGSSEDLKREEAGGIPKPLEKLSPAL
SVILDYDTDVSLEKIQPVTHSGQHST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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