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Report for CCDS24716.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24716.1 Public Mus musculus 11 Nmur2 23 108 98 CCDS HistoryNCBI Gene:216749Re-query CCDS DB by CCDS ID:24716.1Re-query CCDS DB by GeneID:216749See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24716.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037682.2 ENSMUSP00000044718.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037682.2Link to Ensembl Protein Viewer:ENSMUSP00000044718.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000037682Re-query CCDS DB by Protein ID:ENSMUSP00000044718
Original member Current member NCBI NM_153079.4 NP_694719.2 Accepted alive Link to Nucleotide Sequence:NM_153079.4Link to Protein Sequence:NP_694719.2Re-query CCDS DB by Nucleotide ID:NM_153079Re-query CCDS DB by Protein ID:NP_694719Link to BLAST:NP_694719.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694719.2 395 Q8BZ39 395 100% 0 0

Chromosomal Locations for CCDS 24716.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 56026974 56027248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 56029505 56029630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 56032940 56033024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 56040182 56040883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1188 nt):
ATGGGAAAACTTGAAAATGCTTCCTGGATCCACGATTCTCTCATGAAGTACTTGAACAGCACAGAGGAGT
AC
TTGGCCTACCTGTGTGGACCCAAGCGCAGTGACCTATCCCTTCCAGTGTCTGTGGTCTATGCGCTGAT
C
TTCGTGGTGGGGGTGATAGGCAATCTTCTGGTGTGCCTGGTGATTGCCCGACATCAAACTTTGAAGACA
CCC
ACCAACTACTATCTCTTCAGCTTGGCAGTCTCAGACTTGCTGGTCCTGCTCTTAGGTATGCCACTGG
AG
GTCTACGAGTTGTGGCACAATTATCCCTTCCTGTTTGGGCCGGTGGGATGCTACTTCAAGACAGCCCT
T
TTCGAGACTGTGTGCTTTGCCTCCATTCTCAGTGTCACCACGGTTAGCATTGAGCGCTACGTGGCCATT
GTC
CATCCGTTCCGAGCCAAGCTGGAGAGCACACGGCGACGGGCCCTCAGGATCCTCAGCCTAGTCTGGA
GC
TTCTCTGTGGTCTTTTCTTTGCCCAACACCAGCATCCATGGCATCAAGTTCCAGCAGTTTCCCAACGG
G
TCCTCTGTGCCCGGCTCTGCCACCTGCACAGTCACCAAACCCATATGGGTGTATAACTTCATCATCCAA
GCT
ACCTCCTTCCTCTTCTACATCCTCCCGATGACCCTCATCAGCGTCCTCTACTATCTCATGGGGCTCA
GG
CTGAAGAGAGATGAATCTCTTGAGGCAGACAAAGTGACTGTGAATATTCACAGACCCTCCAGAAAATC
A
GTCACCAAGATGCTGTTTGTCTTGGTCCTCGTGTTTGCTATCTGTTGGACCCCTTTCCATGTGGACAGG
CTC
TTCTTCAGCTTTGTGGACGAGTGGACTGAGTCCCTGGCTGCTGTGTTCAACCTCATCCACGTGGTAT
CA
GGTGTCTTTTTCTATCTGAGCTCCGCTGTCAACCCCATTATATATAACCTCCTGTCTCGGCGCTTCCG
G
GCGGCCTTTCGGAATGTTGTCTCTCCTTCCTGCAAATGGTGCCATCCCCAGCATCGCCCACAGGGGCCT
CCA
GCCCAGAAGGTTATCTTCTTGACAGAATGCCACCTTGTGGAGCTGACAGAGGATGCGGGCCCCCAGT
TC
CCTTGTCAGTCATCCATCCACAACACCCAACTTACCACCGTCCCCTGTGTTGAAGAGGTACCATGA


Translation (395 aa):
MGKLENASWIHDSLMKYLNSTEEYLAYLCGPKRSDLSLPVSVVYALIFVVGVIGNLLVCLVIARHQTLKT
P
TNYYLFSLAVSDLLVLLLGMPLEVYELWHNYPFLFGPVGCYFKTALFETVCFASILSVTTVSIERYVAI
V
HPFRAKLESTRRRALRILSLVWSFSVVFSLPNTSIHGIKFQQFPNGSSVPGSATCTVTKPIWVYNFIIQ
A
TSFLFYILPMTLISVLYYLMGLR
LKRDESLEADKVTVNIHRPSRKSVTKMLFVLVLVFAICWTPFHVDR
L
FFSFVDEWTESLAAVFNLIHVVS
GVFFYLSSAVNPIIYNLLSRRFRAAFRNVVSPSCKWCHPQHRPQGP
P
AQKVIFLTECHLVELTEDAGPQFPCQSSIHNTQLTTVPCVEEVP




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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