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Report for CCDS23157.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23157.1 Public Mus musculus 9 Nnmt 23 108 98 CCDS HistoryNCBI Gene:18113Re-query CCDS DB by CCDS ID:23157.1Re-query CCDS DB by GeneID:18113See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23157.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI,WTSI ENSMUST00000034808.11 ENSMUSP00000034808.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034808.11Link to Ensembl Protein Viewer:ENSMUSP00000034808.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000034808Re-query CCDS DB by Protein ID:ENSMUSP00000034808
Original member Current member NCBI NM_010924.3 NP_035054.1 Accepted alive Link to Nucleotide Sequence:NM_010924.3Link to Protein Sequence:NP_035054.1Re-query CCDS DB by Nucleotide ID:NM_010924Re-query CCDS DB by Protein ID:NP_035054Link to BLAST:NP_035054.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035054.1 264 O55239 264 100% 0 0

Chromosomal Locations for CCDS 23157.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 48591930 48592362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 48603354 48603561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 48604805 48604958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (795 nt):
ATGGAATCTGGCTTCACCTCCAAGGACACTTATCTAAGTCATTTTAATCCTCGGGATTACTTGGAAAAAT
AT
TACAGCTTTGGGTCCAGACACTGTGCAGAAAACGAGATCCTCAGACATCTGCTGAAAAATCTTTTTAA
G
ATATTCTGCCTGGGTGCTGTAAAAGGAGAACTCCTGATTGACATTGGCTCTGGCCCCACCATCTATCAG
CTT
CTCTCTGCCTGTGAGTCCTTCACGGAGATCATTGTCTCTGACTACACAGACCAGAACCTCTGGGAGC
TG
CAGAAATGGCTGAAGAAGGAACCAGGAGCCTTTGACTGGTCCCCAGTGGTCACCTATGTGTGTGATCT
T
GAAGGCAACAGAATGAAGGGACCTGAGAAGGAGGAGAAGTTGAGGCGTGCAATCAAGCAGGTACTAAAG
TGT
GATGTGACCCAGAGCCAGCCTCTGGGTGGGGTCTCTCTGCCTCCTGCTGACTGCTTGCTCAGCACGC
TG
TGCCTGGATGCTGCCTGCCCTGACCTCCCGGCCTATCGCACTGCCCTCAGGAACCTGGGCAGTCTGCT
C
AAGCCAGGAGGCTTCCTGGTGATGGTAGATGCCCTGAAGAGTAGCTACTACATGATTGGGGAGCAGAAG
TTT
TCCAGCCTTCCCCTGGGATGGGAGACTGTTCGAGATGCTGTGGAAGAGGCCGGTTACACCATTGAGC
AG
TTTGAGGTGATTTCTCAAAATTACTCTTCTACCACATCCAATAATGAAGGACTCTTCTCCCTAGTGGG
G
CGAAAGCCAGGCAGATCTGAATGA


Translation (264 aa):
MESGFTSKDTYLSHFNPRDYLEKYYSFGSRHCAENEILRHLLKNLFKIFCLGAVKGELLIDIGSGPTIYQ
L
LSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGN
RMKGPEKEEKLRRAIKQVLK
C
DVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQK
F
SSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKPGRSE




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser