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Report for CCDS22995.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22995.1 Public Mus musculus 9 Or8b38 23 108 98 CCDS HistoryNCBI Gene:257885Re-query CCDS DB by CCDS ID:22995.1Re-query CCDS DB by GeneID:257885See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 22995.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000081985.1 ENSMUSP00000080646.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000081985.1Link to Ensembl Protein Viewer:ENSMUSP00000080646.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000081985Re-query CCDS DB by Protein ID:ENSMUSP00000080646
Original member Current member NCBI NM_001011739.1 NP_001011739.1 Accepted alive Link to Nucleotide Sequence:NM_001011739.1Link to Protein Sequence:NP_001011739.1Re-query CCDS DB by Nucleotide ID:NM_001011739Re-query CCDS DB by Protein ID:NP_001011739Link to BLAST:NP_001011739.1

Chromosomal Locations for CCDS 22995.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 38061322 38062251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGCTTTAGCAAATGTCTCTTCAGTGAAAGAATTTATCTTGCTGGGCTTGACACAACAGCCAGAGCTCC
AGCTGCCGCTCTTCTTCTTGTTTTTGGGAATCTACGTGGTCTCTGTGATGGGGAACTTGGGCTTGATTGT
TCTGATTGTGTTGAATCCTCACCTGCACACCCCCATGTACTACTTTCTCTTCAACCTTTCCTTTACAGAT
CTCTGCTACTCCTCTGCCATAACCCCCAGAATGCTGGTGGGTTTTGTGAAGCAGAATATCATCTCTCATG
CAGAGTGCTTGACTCAGCTCTTTTTCTTTGCCTTCTTTGTTATTGATGAATGCTACATTTTGACAGCAAT
GGCTTATGACAGATATGCTGCCATTTGTAAGCCCCTGCTTTACCAGGTCACCATGTCTCATCAGGTCTGC
CTATTGATGACTATGGGTGTGTATGTGATGGGCTTTGCTGGTGCCTTGTCCCACATAGTTTGCATGCTGA
GACTCACCTTCTGTGATGGCAACATCATCAATAACTACGTATGTGATGTACATCCTCTCCTTAAACTCTC
CTGCTCAAGTACCTCCATCAATGAGCTGGTACTTTTCATTGTTGTTGGTGTCAATATAACAGTGCCCAGC
CTGACTCTCTTTGTTTCTTATACCTTAATCCTTTCCAACATCCTCAGCATCCATTCTGGGGAAGGTAGGT
CAAAAGCCTTCAGTACCTGTGGCTCCCATGTGATAGCTGTTTCTTTTTTCTTTGGAGCTGCAGCCTTCAT
GTATCTTAAGCCTTCTAGTGCATCTGTGGATGAAGATAAAGTATCTACTATCTTTTATACCATTCTGGGT
CCAATGCTGAATCCTTTCATCTACAGTATAAGGAATAAAGATGTCCACATTGCACTGAAAAAAACTTTGA
AGAAAAAGATACTCACCTAA

Translation (309 aa):
MALANVSSVKEFILLGLTQQPELQLPLFFLFLGIYVVSVMGNLGLIVLIVLNPHLHTPMYYFLFNLSFTD
LCYSSAITPRMLVGFVKQNIISHAECLTQLFFFAFFVIDECYILTAMAYDRYAAICKPLLYQVTMSHQVC
LLMTMGVYVMGFAGALSHIVCMLRLTFCDGNIINNYVCDVHPLLKLSCSSTSINELVLFIVVGVNITVPS
LTLFVSYTLILSNILSIHSGEGRSKAFSTCGSHVIAVSFFFGAAAFMYLKPSSASVDEDKVSTIFYTILG
PMLNPFIYSIRNKDVHIALKKTLKKKILT


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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