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Report for CCDS22811.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22811.1 Public Mus musculus 9 Birc2 23 108 98 CCDS HistoryNCBI Gene:11797Re-query CCDS DB by CCDS ID:22811.1Re-query CCDS DB by GeneID:11797See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22811.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074246.6 ENSMUSP00000091422.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074246.6Link to Ensembl Protein Viewer:ENSMUSP00000091422.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000074246Re-query CCDS DB by Protein ID:ENSMUSP00000091422
Original member Current member EBI ENSMUST00000190341.6 ENSMUSP00000140049.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000190341.6Link to Ensembl Protein Viewer:ENSMUSP00000140049.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000190341Re-query CCDS DB by Protein ID:ENSMUSP00000140049
Original member Current member NCBI NM_001291503.1 NP_001278432.1 Accepted alive Link to Nucleotide Sequence:NM_001291503.1Link to Protein Sequence:NP_001278432.1Re-query CCDS DB by Nucleotide ID:NM_001291503Re-query CCDS DB by Protein ID:NP_001278432Link to BLAST:NP_001278432.1
Original member Current member NCBI NM_007465.3 NP_031491.2 Accepted alive Link to Nucleotide Sequence:NM_007465.3Link to Protein Sequence:NP_031491.2Re-query CCDS DB by Nucleotide ID:NM_007465Re-query CCDS DB by Protein ID:NP_031491Link to BLAST:NP_031491.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001278432.1 612 Q62210 612 100% 0 0
NP_031491.2 612 Q62210 612 100% 0 0

Chromosomal Locations for CCDS 22811.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 7818750 7818943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 7819021 7819062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 7819307 7819561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 7820974 7821219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 7825615 7825663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 7826931 7827009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 7833505 7834478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1839 nt):
ATGGACAAAACTGTCTCCCAGAGACTCGGCCAAGGTACCTTACACCAAAAACTTAAACGTATAATGGAGA
AG
AGCACAATCTTGTCAAATTGGACAAAGGAGAGCGAAGAAAAAATGAAGTTTGACTTTTCGTGTGAACT
C
TACCGAATGTCTACATATTCAGCTTTTCCCAGGGGAGTTCCTGTCTCAGAGAGGAGTCTGGCTCGTGCT
GGC
TTTTATTATACAGGTGTGAATGACAAAGTCAAGTGCTTCTGCTGTGGCCTGATGTTGGATAACTGGA
AA
CAAGGGGACAGTCCTGTTGAAAAGCACAGACAGTTCTATCCCAGCTGCAGCTTTGTACAGACTCTGCT
T
TCAGCCAGTCTGCAGTCTCCATCTAAGAATATGTCTCCTGTGAAAAGTAGATTTGCACATTCGTCACCT
CTG
GAACGAGGTGGCATTCACTCCAACCTGTGCTCTAGCCCTCTTAATTCTAGAGCAGTGGAAGACTTCT
CA
TCAAGGATGGATCCCTGCAGCTATGCCATGAGTACAGAAGAGGCCAGATTTCTTACTTACAGTATGTG
G
CCTTTAAGTTTTCTGTCACCAGCAGAGCTGGCCAGAGCTGGCTTCTATTACATAGGGCCTGGAGACAGG
GTG
GCCTGTTTTGCCTGTGGTGGGAAACTGAGCAACTGGGAACCAAAGGATGATGCTATGTCAGAGCACC
GC
AGACATTTTCCCCACTGTCCATTTCTGGAAAATACTTCAGAAACACAGAGGTTTAGTATATCAAATCT
A
AGTATGCAGACACACTCTGCTCGATTGAGGACATTTCTGTACTGGCCACCTAGTGTTCCTGTTCAGCCC
GAG
CAGCTTGCAAGTGCTGGATTCTATTACGTGGATCGCAATGATGATGTCAAGTGCTTTTGTTGTGATG
GT
GGCTTGAGATGTTGGGAACCTGGAGATGACCCCTGGATAGAACACGCCAAATGGTTTCCAAGGTGTGA
G
TTCTTGATACGGATGAAGGGTCAGGAGTTTGTTGATGAGATTCAAGCTAGATATCCTCATCTTCTTGAG
CAG
CTGTTGTCCACTTCAGACACCCCAGGAGAAGAAAATGCTGACCCTACAGAGACAGTGGTGCATTTTG
GC
CCTGGAGAAAGTTCGGAAGATGTCGTCATGATGAGCACGCCTGTGGTTAAAGCAGCCTTGGAAATGGG
C
TTCAGTAGGAGCCTGGTGAGACAGACGGTTCAGCGGCAGATCCTGGCCACTGGTGAGAACTACAGGACC
GTC
AATGATATTGTCTCAGTACTTTTGAATGCTGAAGATGAGAGAAGAGAAGAGGAGAAGGAAAGACAGA
CT
GAAGAGATGGCATCAGGTGACTTATCACTGATTCGGAAGAATAGAATGGCCCTCTTTCAACAGTTGAC
A
CATGTCCTTCCTATCCTGGATAATCTTCTTGAGGCCAGTGTAATTACAAAACAGGAACATGATATTATT
AGA
CAGAAAACACAGATACCCTTACAAGCAAGAGAGCTTATTGACACCGTTTTAGTCAAGGGAAATGCTG
CA
GCCAACATCTTCAAAAACTCTCTGAAGGAAATTGACTCCACGTTATATGAAAACTTATTTGTGGAAAA
G
AATATGAAGTATATTCCAACAGAAGACGTTTCAGGCTTGTCATTGGAAGAGCAGTTGCGGAGATTACAA
GAA
GAACGAACTTGCAAAGTGTGTATGGACAGAGAGGTTTCTATTGTGTTCATTCCGTGTGGTCATCTAG
TA
GTCTGCCAGGAATGTGCCCCTTCTCTAAGGAAGTGCCCCATCTGCAGGGGGACAATCAAGGGGACTGT
G
CGCACATTTCTCTCATGA


Translation (612 aa):
MDKTVSQRLGQGTLHQKLKRIMEKSTILSNWTKESEEKMKFDFSCELYRMSTYSAFPRGVPVSERSLARA
G
FYYTGVNDKVKCFCCGLMLDNWKQGDSPVEKHRQFYPSCSFVQTLLSASLQSPSKNMSPVKSRFAHSSP
L
ERGGIHSNLCSSPLNSRAVEDFSSRMDPCSYAMSTEEARFLTYSMWPLSFLSPAELARAGFYYIGPGDR
V
ACFACGGKLSNWEPKDDAMSEHRRHFPHCPFLENTSETQRFSISNLSMQTHSARLRTFLYWPPSVPVQP
E
QLASAGFYYVDRNDDVKCFCCDGGLRCWEPGDDPWIEHAKWFP
RCEFLIRMKGQEFVDEIQARYPHLLE
Q
LLSTSDTPGEENADPTETVVHFGPGESSEDVVMMSTPVVKAALEMGFSRSLVRQTVQRQILATGENYRT
V
NDIVSVLLNAEDERREEEKERQTEEMAS
GDLSLIRKNRMALFQQLTHVLPILDNLLEASVITKQEHDII
R
QKTQIPLQARELIDTVLVKGNAAANIFKNSLKEIDSTLYENLF
VEKNMKYIPTEDVSGLSLEEQLRRLQ
E
ERTCKVCMDREVSIVFIPCGHLVVCQECAPSLRKCPICRGTIKGTVRTFLS




Links Key
 Links to:   History report
  BLAST report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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