CCDS Report for Consensus CDS

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Report for CCDS22736.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
22736.1	Public	Mus musculus	8	Zc3h18	23	108	98

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22736.1

Original	Current	Source	Nucleotide ID	Protein ID	Status in CCDS	Seq. Status	Links
		EBI	ENSMUST00000093073.11	ENSMUSP00000090761.5	Accepted	alive
		NCBI	NM_001029994.1	NP_001025165.1	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_001025165.1	948	Q0P678-1	948	100%	0	0

Chromosomal Locations for CCDS 22736.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)

Genome Browser links:

Chromosome	Start	Stop
8	122383414	122384004
8	122386862	122386946
8	122397818	122397966
8	122398236	122398328
8	122399005	122399162
8	122401591	122401708
8	122403151	122403419
8	122407332	122407523
8	122408243	122408368
8	122410881	122410985
8	122411284	122411427
8	122411638	122411703
8	122412990	122413150
8	122413263	122413462
8	122413857	122413950
8	122416036	122416132
8	122416476	122416674

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2847 nt):
ATGGATGTGGCCGAGAGCCCTGAACTGGATCCTCACTCCCCAGAGGATGAAGAGCAGCCGGCACTCTCAG ATGATGACATTCTAAGAGAAAGTGGATCTGAACAAGATTTGGATGGAGCTGGGGAAAGGGCGTCTGATTT GGAGGAGGAGGAAAATGCAACCAGGGTACAAAGCCAGGAGGAGACTCGCTCGGATGAGGAAGACCGAGCC AGTGAGCCCAAGTCCCAAGATCAGGACTCAGAGGCTCATGAGCTGAGCAGGGGCCCAGCGGGATCCCCAT GCGAGGAGGGGGATGATGTTGAGGAAGATGGGACAAGTGACCTCAGGGACGAAGCCTCCTCGGTGACCCG GGAACTGGATGAGCATGAACTAGACTATGATGAGGAGGTCCCTGAGGAGCCAGCTCCTGCTGCCCAGGAG GAGGAGGCTGAGAAGGCTGGGGCTGAGGAGGAGGAGGAGAAGGGGGAAGGGGCTCCCGGAGAGGAAGGGA AGCCTGATGTTCAAAGTGTGGGAGAACAAGAACCCACAGAAGCTGCCAAGGAGAAGAAGAAAGAGGATGA CGACGGGGAGATCGATGATGGCGAGATAGACGATGATGACTTGGAGGAAGGCGAGGTGAAGGACCCCAGT GACCGGAAGGTGAGGCCTCGCCCCACCTGCCGATTCTTCATGAAAGGAAACTGCACGTGGGGAATGAGCT GTAGGTTTATCCACCCTGGAGTGAATGACAAAGGCAACTACTCCCTCATCACCAAAGCGGAACCTTTTCC ACCCAACGGTGCCCCGCCTCTTGGACCTCACCCACTGATGCCTGCCAACCCTTGGGGTGGGCCAGTGGTT GATGAAATTTTGCCTCCACCCCCTCCAGAGCCCCCAACAGAGAGCGCCTGGGAACGTGGACTCCGACATG CAAAAGAGGTTTTAAAAAAAGCAACCATTCGGAAAGAGCAGGAGCCCGACTTTGAAGAAAAAAGGTTCAC AGTAACCATTGGTGAAGACGACCGGGAGTTTGACAAGGAGAATGAAGTCTTCCGAGATTGGAATTCTCGA GTCCCGAGAGATGTCAGAGACACAACACTTGAGCCTTATGCAGACCCTTATTATGACTATGAGATAGAAC GGTTTTGGCGTGGTGGACAGTACGAGAATTTCAGGGTGCAGTATACAGAAGCAGAACCGTATCATAACTA TCGCGAACGAGAGAGGGAACGAGAGCGAGAAAACAGACAACGAGAACGCGAGCGGGAACGAGAGCGTGAC CGAGAGCGGGAGCGCAGGCAGAGAGAGCGGGAGCGAGAACGGGAACGAGAGCGGGACAAGGAGCGGCAGC GGAGGAAAGAGGAGTGGGAGAGAGAGAGAGCCAAGCGAGACGAGAAGGACCGGCAACACCGAGACCGAGA CAGGGACAAGGACCGGGAGAAGGACAAGGAGAAGCCGAAGCCCAGGTCCCCACAGCCACCGAGCCGTCAA GCTGAACCACCAAAGAAGGAGAGCACCTCTGTGGGGCCCCAGGTGAAGCGAGCCGATGAGTGGAAGGACC CCTGGCGCCGATCCAAGTCTCCCAAGAAGAAGCTTGGCGTGTCCGTCTCCCCAAGCCGGGCACGAAGACG TCGCAAAACCTCCGCCTCCTCAGCCTCTGCTTCCAATTCCTCCAGGTCATCGTCACGGTCTTCATCCTAC TCTGGCTCTGGCTCGTCCCGCTCCCGCTCCCGCTCCTCCTCCTACAGCTCCTATTCTAGCCGCTCTTCCA GACACAGCTCGTTCTCAGGCAGCCGATCCAGGTCCCGGTCCTTCTCCTCGTCCCCATCCCCGTCTCCCAC ACCTTCCCCACACAGACCTCCAGTCAGAACCAAGGGGGAGCCGGCCCCACCTCCTGGGAAAGCAGGGGAG AAGTCAATAAAGAAGCCAGCCCCTCCCCCAGCCCCACCACAGGCCACCAAAACTACTGCTCCTGGTCCTG AGCCTGCCAAACCTGGAGATCTCCGAGAAGCCAGGAGAAAGGAGCGGCAAACCAGGACTCCCCCAAGGAG GCGGACGCTCAGCGGCAGTGGTAGCGGCAGTGGTAGCAGCTACAGTGGCTCCAGTTCCCGATCCAGGTCT CTGAGTGTGAGCAGCGTTTCCTCAGTGTCCAGCGCCACCTCGAGTAGCAGCTCAGTGCACAGTGTGGACT CAGATGACATGTATGCAGACCTGGCCAGTCCTGTGTCCTCAGCCAGCTCTCGATCCCCAACTCCTGCCCA GACCAAGAAGGAGAGAGGGAAATCCAAGAAAGAAGACGGAGTGAGAGAGGAAAAGCGGAGGCGGGACCCA TCCGCGCAGCCGCCCAAGTCCTCTAAAGCTCCAGCGGGTGGGAAGGCCTCCCAGCAGGCAGCGGCGCCTC AGCCGGCGGTCCCCGGGCAGCCCCAACAGGGCTCCTTTGTTGCCCACAAGGAGATAAAGCTGACACTGCT GAACAAGGCGGCTGATAAAGGAAGCCGGAAGCGCTATGAGCCATCAGACAAGGACCGGCAGAGCCCTCCT GCCAAGAAGGCCAACTTGTCCCCAGACCGAGGTTCTCGAGACCGGAAATCAGGTGGAAGAATGGGCTCCC CAAAACCAGAGAGGCAGAGAGGCCAGAACGCTAAAGCTCCTGCTGCCCCAGCGGACAGGAAGCGTCCACT GTCACCCCAGTCTAAGGGCTCCAGCAAGGTCACCAGCGTGCCTGGCAAAGCCACAGATACTGCCACAGCA GGCACCAAGTCAGGGAAGGCCAGCACATTGTCACGGCGAGAGGAGCTCCTTAAACAGCTCAAAGCGGTTG AGGACGCCATCGCTCGCAAGCGGGCCAAGATCCCCGGGAAAGTGTAG
Translation (948 aa):
MDVAESPELDPHSPEDEEQPALSDDDILRESGSEQDLDGAGERASDLEEEENATRVQSQEETRSDEEDRA SEPKSQDQDSEAHELSRGPAGSPCEEGDDVEEDGTSDLRDEASSVTRELDEHELDYDEEVPEEPAPAAQE EEAEKAGAEEEEEKGEGAPGEEGKPDVQSVGEQEPTEAAKEKKKEDDDGEIDDGEIDDDDLEEGEVKDPS DRKVRPRPTCRFFMKGNCTWGMSCRFIHPGVNDKGNYSLITKAEPFPPNGAPPLGPHPLMPANPWGGPVV DEILPPPPPEPPTESAWERGLRHAKEVLKKATIRKEQEPDFEEKRFTVTIGEDDREFDKENEVFRDWNSR VPRDVRDTTLEPYADPYYDYEIERFWRGGQYENFRVQYTEAEPYHNYRERERERERENRQRERERERERD RERERRQRERERERERERDKERQRRKEEWERERAKRDEKDRQHRDRDRDKDREKDKEKPKPRSPQPPSRQ AEPPKKESTSVGPQVKRADEWKDPWRRSKSPKKKLGVSVSPSRARRRRKTSASSASASNSSRSSSRSSSY SGSGSSRSRSRSSSYSSYSSRSSRHSSFSGSRSRSRSFSSSPSPSPTPSPHRPPVRTKGEPAPPPGKAGE KSIKKPAPPPAPPQATKTTAPGPEPAKPGDLREARRKERQTRTPPRRRTLSGSGSGSGSSYSGSSSRSRS LSVSSVSSVSSATSSSSSVHSVDSDDMYADLASPVSSASSRSPTPAQTKKERGKSKKEDGVREEKRRRDP SAQPPKSSKAPAGGKASQQAAAPQPAVPGQPQQGSFVAHKEIKLTLLNKAADKGSRKRYEPSDKDRQSPP AKKANLSPDRGSRDRKSGGRMGSPKPERQRGQNAKAPAAPADRKRPLSPQSKGSSKVTSVPGKATDTATA GTKSGKASTLSRREELLKQLKAVEDAIARKRAKIPGKV

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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