CCDS
Home
FTP
Process
Releases & Statistics
Collaborators
EBI
HGNC
MGI
NCBI
Contact Us
email CCDS
Genome Displays Related Resources
Gene
HomoloGene
MANE
RefSeq
|
 |
Report for CCDS22580.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
22580.1 |
Public |
Mus musculus |
8 |
Terb1 |
23 |
108 |
98 |
          |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 22580.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
 |
 |
EBI |
ENSMUST00000064576.7 |
ENSMUSP00000067324.1 |
Accepted |
alive |
      |
 |
 |
NCBI |
NM_180958.3 |
NP_851289.2 |
Accepted |
alive |
        |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_851289.2 |
768 |
Q8C0V1-1 |
768 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 22580.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2307 nt): ATGGAAAGTGAGAAGCCAAAGAAAACACAAGAAATGAAGACTGACCTGAAGTTACTGTTGGAATGTCTGA AGTATCACATGGGCAACCCTTTGTCACAAAAGGAAGTTTTGATCACGATTCATTCAGTTTGTAAACAAAA CAGTGATGCAGGTATTTATTTCCGGGAAATTGGTGGTTTGATGTTTATAATAAACCTTGCAAAGTCAAGT GAGCAGAGCTTGGTAAAAGAAGCAGCCTTATACACATTAGGATCTATTGCAGAAGAAAATGTTTACTGTC AGCAATCTTTGTGTACTTCAGAATTATTTCAAGATTTAACCGGGCTCTTAACTAATGATGATTCAAACAC AAATTTGAAAAGAATGTCTGTCTATGTTCTTTTGGTTCTGGTTTCAAATAATAGAAATGGACAAACTCTT GTGAGAGAAGTGGGTTGTATTGAAGTTCTGTCACAGATGTTCAGGACAGTTCTTTCCAATTATGAGTTGA ATTTGTCAGATAATAGTGTTTTCCAGAGCTATCTGCTATGGTCGTCTGTGTGCAGTACTCTGTGTGTATG TGTCAACAATCCTCAAAATGATGAGAATCAAATGCTTTGTTGTTCACTTTTTCCATGTGTTAATGAATGG CTAATGAACTGCATGAGACCTGAGGTAATTCGACCTATATGCTCATTTATTGGACTTACTCTTGCAAATA ATACACACGCTCAGAACTGCTTTGTCTCTTCGGGTGGACTGGATGTTTTGTGTCAAGTTCTTGTGCAGCT GGAGTCTGATTCACACAATACTCTTTCCAGTGCTAAGCTTGCAGTCATAGTGACAAAGACCATGGATGCA TGTATTACTGATAACTCAGCTGCTTTTACAGTGGTATTATCCAAGTACCACATTGTTTCTACACTTCTGG CATTACTGCTTCATGAAAGTCTTGATTCAAGAGAAAAATTTAGCATCATACTTGCCATTGGTCACTGCAC AGAGGATTGTGAGAAAAATCAGTATGAACTTTTAAAAAACAATGGGCTTCCATTGATGATACAAGCCTTA ACTGAGTTTAAGAATGAAGACCTAAGCAAAGCTGCCACTTACGTGCTTCACAACTGCAAAAAAATTACTG GGAAATTATCTCTAAGTCTAGGACAGAATTCTTTTGGTGAAAATGAAATTGAACTAAAGGACATAAGCGA AAAAGAGACTCTTAGAGAGCACTGGAAGGCAGCAAAGGAAATTCTATGCAGAATAAAACAATTTGAAAAA GGAGGGAAAGAGGAGAAGCAACAAAACAGGAGTGGACACTATAAGGATAATACCCCATCTATGAAAGTAA ACATACAGACCAATTTGAAACGTCTCTGTGCAGATAGTACTGGAGGTACCAGAGCAGAAGATAAGGATAT AAACCAGTCTAGAGAGCTTCGCAGCTATAAGCCCAGTGAAATCATGTCTAAAGCTTGTGCAAATGAAAAC CAACTGACGACTCGGAAGAAGAACACAAATCCAGTTCATCCTTTCTGTAAGGAGAAAGGGCAGAGTAAGA TTGTACATGAAACCACTCCAAGCTGTGCTCAAAACTTAGACAAGGAAAAAACCTTTGACCAAAAGGATTC TGTTTCTCAATCGAGTGACCAGGTCCTTAAACATCTGCCTCATACTGTCAAAAATAGAAAGCAGGTACCA GAAACAGATCCATTTACATTGTGTTTAGACATAATAGATAGAGAAGTTGGTATTCAAGCAACTGACAGCT GTTCCAGAATGTTAAAATATACGTGCTCAGGTTGCATAGTAGCAAGAAAACTCCTCAACAGCCGAAATTT TAGCAAGTTTTTGCACTCATGTGCATACCAGTGTGTTCACCATAAAGTCATTATGGAAGCTGAAGACAAA TATAAAAATGAACTAAGGAAAACATTTATCTGTGCAAAAAAAATTTTGCTGACTCCCTGTAGAAGAAGAC AACTTTGTAAAGAATCTACTGCCTCTGAAGAACTAAAAATTGTTCATCAAAAACCAGATAGTAAAAAACT TCCAGGTTTGGAGGCACAGGCCTTAAATACCAGCATTCCAGAGGCTATGGAAAGAAGATCACCAGTTCCA GGCCAGAGTGGACTACATAAAAAAAGAAGAATTCGTAAAGACTTTACCAAAGAAGAAGTAAATTATCTTT TCCATGGAGTTAAAACAATGGGAAATCATTGGAATTCAATTTTGTGGTCTTTCCCCTTTCAGAAAGGACG AAGGGCTGTAGACCTTGCTCACAAATACCACAGGCTGATCAAAGGCCCCAGCTGTGCAGCCCTGTGA
Translation (768 aa): MESEKPKKTQEMKTDLKLLLECLKYHMGNPLSQKEVLITIHSVCKQNSDAGIYFREIGGLMFIINLAKSS EQSLVKEAALYTLGSIAEENVYCQQSLCTSELFQDLTGLLTNDDSNTNLKRMSVYVLLVLVSNNRNGQTL VREVGCIEVLSQMFRTVLSNYELNLSDNSVFQSYLLWSSVCSTLCVCVNNPQNDENQMLCCSLFPCVNEW LMNCMRPEVIRPICSFIGLTLANNTHAQNCFVSSGGLDVLCQVLVQLESDSHNTLSSAKLAVIVTKTMDA CITDNSAAFTVVLSKYHIVSTLLALLLHESLDSREKFSIILAIGHCTEDCEKNQYELLKNNGLPLMIQAL TEFKNEDLSKAATYVLHNCKKITGKLSLSLGQNSFGENEIELKDISEKETLREHWKAAKEILCRIKQFEK GGKEEKQQNRSGHYKDNTPSMKVNIQTNLKRLCADSTGGTRAEDKDINQSRELRSYKPSEIMSKACANEN QLTTRKKNTNPVHPFCKEKGQSKIVHETTPSCAQNLDKEKTFDQKDSVSQSSDQVLKHLPHTVKNRKQVP ETDPFTLCLDIIDREVGIQATDSCSRMLKYTCSGCIVARKLLNSRNFSKFLHSCAYQCVHHKVIMEAEDK YKNELRKTFICAKKILLTPCRRRQLCKESTASEELKIVHQKPDSKKLPGLEAQALNTSIPEAMERRSPVP GQSGLHKKRRIRKDFTKEEVNYLFHGVKTMGNHWNSILWSFPFQKGRRAVDLAHKYHRLIKGPSCAAL
|