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Report for CCDS1850.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1850.1 Public Homo sapiens 2 ACYP2 22 109 92 CCDS HistoryNCBI Gene:98Re-query CCDS DB by CCDS ID:1850.1Re-query CCDS DB by GeneID:98See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 1850.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394666.7 ENSP00000378161.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394666.7Link to Ensembl Protein Viewer:ENSP00000378161.3Re-query CCDS DB by Nucleotide ID:ENST00000394666Re-query CCDS DB by Protein ID:ENSP00000378161
Original member NCBI NM_138448.3 NP_612457.1 Updated not alive Link to Nucleotide Sequence:NM_138448.3Link to Protein Sequence:NP_612457.1Re-query CCDS DB by Nucleotide ID:NM_138448Re-query CCDS DB by Protein ID:NP_612457
Current member NCBI NM_138448.4 NP_612457.1 Accepted alive Link to Nucleotide Sequence:NM_138448.4Link to Protein Sequence:NP_612457.1Re-query CCDS DB by Nucleotide ID:NM_138448Re-query CCDS DB by Protein ID:NP_612457Link to BLAST:NP_612457.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612457.1 99 P14621 99 100% 0 0

Chromosomal Locations for CCDS 1850.1

Assembly GRCh38.p12 (GCF_000001405.38)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 54115699 54115756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 54135453 54135469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 54138639 54138748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 54304688 54304802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (300 nt):
ATGTCTACCGCCCAGTCACTCAAATCCGTGGACTACGAGGTGTTCGGAAGAGTGCAGGGTGTTTGCTTCA
GAATGTATACAGAAGATGAAGCTAGGAAAATAGGAGTGGTTGGCTGGGTGAAGAATACCAGCAAAGGCAC
CGTGACAGGCCAAGTGCAGGGGCCAGAAGACAAAGTCAATTCCATGAAGTCCTGGCTGAGCAAGGTTGGA
AGCCCTAGTTCTCGCATTGACCGCACAAACTTTTCTAATGAAAAAACCATCTCTAAGCTTGAATACTCTA
ATTTTAGTATTAGATACTAA

Translation (99 aa):
MSTAQSLKSVDYEVFGRVQGVCFRMYTEDEARKIGVVGWVKNTSKGTVTGQVQGPEDKVNSMKSWLSKVG
SPSSRIDRTNFSNEKTISKLEYSNFSIRY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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