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Report for CCDS16386.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16386.1 Public Mus musculus 2 Olfr1247 23 108 98 CCDS HistoryNCBI Gene:258968Re-query CCDS DB by CCDS ID:16386.1Re-query CCDS DB by GeneID:258968See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16386.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI,WTSI ENSMUST00000099771.1 ENSMUSP00000097359.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000099771.1Link to Ensembl Protein Viewer:ENSMUSP00000097359.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000099771Re-query CCDS DB by Protein ID:ENSMUSP00000097359
Original member Current member EBI,WTSI ENSMUST00000111532.3 ENSMUSP00000107157.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000111532.3Link to Ensembl Protein Viewer:ENSMUSP00000107157.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000111532Re-query CCDS DB by Protein ID:ENSMUSP00000107157
Original member Current member EBI,WTSI ENSMUST00000216424.1 ENSMUSP00000149408.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000216424.1Link to Ensembl Protein Viewer:ENSMUSP00000149408.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000216424Re-query CCDS DB by Protein ID:ENSMUSP00000149408
Original member Current member NCBI NM_146966.2 NP_667177.2 Accepted alive Link to Nucleotide Sequence:NM_146966.2Link to Protein Sequence:NP_667177.2Re-query CCDS DB by Nucleotide ID:NM_146966Re-query CCDS DB by Protein ID:NP_667177Link to BLAST:NP_667177.2

Chromosomal Locations for CCDS 16386.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 89609156 89610100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGGGAGAGACTAACAATGTCACAGAATTTGTCCTTCTGGGCCTCACTCAGGATCCTACTGGGCAAAAAG
CA
TTGTTTGTCATGTTTTTGCTCATGTACATTGTGACTATTGTGGGCAACCTGCTCATCGTGGGGACAGT
G
ATTGCCAGCCCCTCCTTGAATTCCCCAATGTACTTCTTCCTTGCCTTTCTGTCACTCATGGATGCTGTT
TAT
TCTACTGCCATCTTGCCCAAGTTGCTTAAAGACTTAGTTTGTGATAAAAAGACCATCTCCTTCACAG
CT
TGTCTGGTTCAGCTCTTTGTAGAGCACTTATTTGGTGGTGCTGAGGTCTTCCTTCTGGTGGTGATGGC
C
TATGATCGCTATGTGGCCATCTGTAAGCCACTGCACTATTTAACTGTCATGAATCAACAGGTTTGTATC
TCA
CTTTTGGTGGTAGCCTGGGTTGGGGGATTTGCACATGCTCTGGTTCAAGTTCTCTCTGTATATAAAC
TT
CCTTTCTGTGGACCTAATGTCATTGATCACTTTGGCTGTGACATGTATCCTTTATTGGCACTTGTGTG
C
ACTGACACCTACTTTATTGGCCTCACGGTAGTTGCCAATAATGGAGCCATGTGTATGGTAGTCTTTGTC
CTT
CTTCTATTTTCCTATGGAATTATCTTAAGCTCCCTTAAGACTCACAGTCAGGAAGGGAGGCGCAAAG
CC
CTGTCCACCTGCAGCTCCCACATCATGGTTGTTGTTCTTTTCTTTGTTCCCTGTATATTCATGTATGT
T
AGACCTGTCTCCAACTTCCCTATTGATAAATCTATTTCTGTTTTTTATACAGCTATTACTCCCATGTTG
AAT
CCTTTGATATATACATTGAGAAATTCAGAGATTAAAAATTCTATGGGAAAGCTCTGGAGTAAAATGA
TA
AGTATAGATAGAGTAAGAATTTTTGCATACTGA


Translation (314 aa):
MGETNNVTEFVLLGLTQDPTGQKALFVMFLLMYIVTIVGNLLIVGTVIASPSLNSPMYFFLAFLSLMDAV
Y
STAILPKLLKDLVCDKKTISFTACLVQLFVEHLFGGAEVFLLVVMAYDRYVAICKPLHYLTVMNQQVCI
S
LLVVAWVGGFAHALVQVLSVYKLPFCGPNVIDHFGCDMYPLLALVCTDTYFIGLTVVANNGAMCMVVFV
L
LLFSYGIILSSLKTHSQEGRRKALSTCSSHIMVVVLFFVPCIFMYVRPVSNFPIDKSISVFYTAITPML
N
PLIYTLRNSEIKNSMGKLWSKMISIDRVRIFAY




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser