NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS16021.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16021.1 Public Mus musculus 2 Acvr2a 23 108 98 CCDS HistoryNCBI Gene:11480Re-query CCDS DB by CCDS ID:16021.1Re-query CCDS DB by GeneID:11480See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16021.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000063886.3 ENSMUSP00000067305.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000063886.3Link to Ensembl Protein Viewer:ENSMUSP00000067305.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000063886Re-query CCDS DB by Protein ID:ENSMUSP00000067305
Original member Current member NCBI NM_007396.4 NP_031422.3 Accepted alive Link to Nucleotide Sequence:NM_007396.4Link to Protein Sequence:NP_031422.3Re-query CCDS DB by Nucleotide ID:NM_007396Re-query CCDS DB by Protein ID:NP_031422Link to BLAST:NP_031422.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031422.3 513 P27038 513 100% 0 0

Chromosomal Locations for CCDS 16021.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 48814772 48814826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48870289 48870496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48873057 48873166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48873319 48873473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48890298 48890441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48892129 48892272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48893507 48893652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48894666 48894780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48896972 48897110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48898478 48898608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48899594 48899788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1542 nt):
ATGGGAGCTGCTGCAAAGTTGGCGTTCGCCGTCTTTCTTATCTCTTGCTCTTCAGGTGCTATACTTGGCA
GATCAGAAACTCAGGAGTGTCTTTTCTTTAATGCTAATTGGGAAAGAGACAGAACCAACCAGACTGGTGT
TGAACCTTGCTATGGTGATAAAGATAAACGGCGACATTGTTTTGCTACCTGGAAGAATATTTCTGGTTCC
ATTGAAATAGTGAAGCAAGGTTGTTGGCTGGATGATATCAACTGCTATGACAGGACTGATTGTATAGAAA
AAAAAGACAGCCCTGAAGTGTACTTTTGTTGCTGTGAGGGCAATATGTGTAATGAAAAGTTCTCTTATTT
TCCGGAGATGGAAGTCACACAGCCCACTTCAAATCCTGTTACACCGAAGCCACCCTATTACAACATTCTG
CTGTATTCCTTGGTACCACTAATGTTAATTGCAGGAATTGTCATTTGTGCATTTTGGGTGTACAGACATC
ACAAGATGGCCTACCCTCCTGTACTTGTTCCTACTCAAGACCCAGGACCACCCCCACCTTCCCCATTACT
AGGGTTGAAGCCATTGCAGCTGTTAGAAGTGAAAGCAAGGGGAAGATTTGGTTGTGTCTGGAAAGCCCAG
TTGCTCAATGAATATGTGGCTGTCAAAATATTTCCAATACAGGACAAACAGTCCTGGCAGAATGAATATG
AAGTCTATAGTCTACCTGGAATGAAGCATGAGAACATACTACAGTTCATTGGTGCAGAGAAAAGAGGCAC
CAGTGTGGATGTGGACCTGTGGCTAATCACAGCATTTCATGAAAAGGGCTCACTGTCAGACTTTCTTAAG
GCTAATGTGGTCTCTTGGAATGAACTTTGTCATATTGCAGAAACCATGGCTAGAGGATTGGCATATTTAC
ATGAGGATATACCTGGCTTAAAAGATGGCCACAAGCCTGCAATCTCTCACAGGGACATCAAAAGTAAAAA
TGTGCTGTTGAAAAACAATCTGACAGCTTGCATTGCTGACTTTGGGTTGGCCTTAAAGTTCGAGGCTGGC
AAGTCTGCAGGTGACACCCATGGGCAGGTTGGTACCCGGAGGTATATGGCTCCAGAGGTGTTGGAGGGTG
CTATAAACTTCCAAAGGGACGCATTTCTGAGGATAGATATGTACGCCATGGGATTAGTCCTATGGGAATT
GGCTTCTCGTTGCACTGCTGCAGATGGACCCGTAGATGAGTACATGTTACCATTTGAGGAAGAAATTGGC
CAGCATCCATCTCTTGAAGATATGCAGGAAGTTGTTGTGCATAAAAAAAAGAGGCCTGTTTTAAGAGATT
ATTGGCAGAAACATGCAGGAATGGCAATGCTCTGTGAAACGATAGAAGAATGTTGGGATCATGATGCAGA
AGCCAGGTTATCAGCTGGATGTGTAGGTGAAAGAATTACTCAGATGCAAAGACTAACAAATATCATTACT
ACAGAGGACATTGTAACAGTGGTCACAATGGTGACAAATGTTGACTTTCCTCCCAAAGAATCTAGTCTAT
GA

Translation (513 aa):
MGAAAKLAFAVFLISCSSGAILGRSETQECLFFNANWERDRTNQTGVEPCYGDKDKRRHCFATWKNISGS
IEIVKQGCWLDDINCYDRTDCIEKKDSPEVYFCCCEGNMCNEKFSYFPEMEVTQPTSNPVTPKPPYYNIL
LYSLVPLMLIAGIVICAFWVYRHHKMAYPPVLVPTQDPGPPPPSPLLGLKPLQLLEVKARGRFGCVWKAQ
LLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK
ANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG
KSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG
QHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLTNIIT
TEDIVTVVTMVTNVDFPPKESSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH