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Report for CCDS15518.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15518.1 Public Mus musculus 1 Dusp23 23 108 98 CCDS HistoryNCBI Gene:68440Re-query CCDS DB by CCDS ID:15518.1Re-query CCDS DB by GeneID:68440See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15518.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027826.6 ENSMUSP00000027826.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027826.6Link to Ensembl Protein Viewer:ENSMUSP00000027826.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000027826Re-query CCDS DB by Protein ID:ENSMUSP00000027826
Original member NCBI NM_026725.2 NP_081001.1 Updated not alive Link to Nucleotide Sequence:NM_026725.2Link to Protein Sequence:NP_081001.1Re-query CCDS DB by Nucleotide ID:NM_026725Re-query CCDS DB by Protein ID:NP_081001
Current member NCBI NM_026725.3 NP_081001.1 Accepted alive Link to Nucleotide Sequence:NM_026725.3Link to Protein Sequence:NP_081001.1Re-query CCDS DB by Nucleotide ID:NM_026725Re-query CCDS DB by Protein ID:NP_081001Link to BLAST:NP_081001.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081001.1 150 Q6NT99 150 100% 0 0

Chromosomal Locations for CCDS 15518.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 172631641 172631826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172632616 172632882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (453 nt):
ATGGGCGTGCAACCCCCCAACTTCTCCTGGGTGCTTCCGGGACGGCTGGCCGGACTGGCGTTGCCCCGGC
TG
CCCGCGCACTACCAGTTCCTGCTGGACCAGGGTGTGCGGCACCTGGTGTCCCTGACGGAGCGCGGACC
C
CCTCACAGTGACAGCTGTCCCGGCCTCACGCTGCACCGAATGCGCATCCCTGACTTTTGCCCGCCGTCC
CCG
GAACAGATCGACCAATTTGTGAAGATCGTGGACGAGGCCAATGCCCGGGGAGAGGCTGTTGGAGTGC
AC
TGTGCCCTAGGCTTTGGCCGCACTGGCACCATGCTAGCCTGCTACTTGGTGAAGGAGCGGGCTTTGGC
C
GCAGGAGATGCCATTGCTGAGATCCGGCGCCTGCGACCAGGATCCATTGAGACGTATGAACAGGAGAAG
GCC
GTCTTCCAGTTCTACCAGCGAACAAAATGA


Translation (150 aa):
MGVQPPNFSWVLPGRLAGLALPRLPAHYQFLLDQGVRHLVSLTERGPPHSDSCPGLTLHRMRIPDFCPPS
P
EQIDQFVKIVDEANARGE
AVGVHCALGFGRTGTMLACYLVKERALAAGDAIAEIRRLRPGSIETYEQEK
A
VFQFYQRTK




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser