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Report for CCDS14808.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14808.1 Public Mus musculus 1 Atp6v1h 23 108 98 CCDS HistoryNCBI Gene:108664Re-query CCDS DB by CCDS ID:14808.1Re-query CCDS DB by GeneID:108664See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14808.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000044369.12 ENSMUSP00000040756.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000044369.12Link to Ensembl Protein Viewer:ENSMUSP00000040756.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000044369Re-query CCDS DB by Protein ID:ENSMUSP00000040756
Original member Current member NCBI NM_133826.5 NP_598587.2 Accepted alive Link to Nucleotide Sequence:NM_133826.5Link to Protein Sequence:NP_598587.2Re-query CCDS DB by Nucleotide ID:NM_133826Re-query CCDS DB by Protein ID:NP_598587Link to BLAST:NP_598587.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598587.2 483 Q8BVE3 483 100% 0 0

Chromosomal Locations for CCDS 14808.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 5084451 5084563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 5089009 5089111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 5093363 5093452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 5095615 5095728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 5098029 5098133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 5101070 5101123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 5117390 5117487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 5124277 5124469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 5133084 5133262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 5135812 5135937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 5143750 5143851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 5149948 5150061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 5162105 5162165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1452 nt):
ATGACCAAGATGGACATTCGAGGTGCTGTGGATGCTGCTGTCCCAACTAACATCATTGCGGCCAAGGCTG
CTGAAGTTCGTGCCAACAAAGTGAACTGGCAGTCTTATCTTCAGGGGCAGATGATTTCTGCTGAAGATTG
TGAATTTATTCAAAGGTTTGAAATGAAAAGAAGTTCCGAGGACAAGCAAGAGATGCTTCAAACTGAAGGC
AGCCAGTGTGCTAAAACATTTATAAATCTGATGACGCACATCTCCAAAGAACAGACAGTGCAGTACATAC
TAACCATGGTTGACGATATGCTGCAGGAAAATCACCAGCGTGTCAGCATTTTCTTTGACTATGCGAAACG
AAGCAAGAGCACTGCCTGGCCATACTTCCTGCCAATGTTGAATCGCCAGGATCCCTTTACTGTTCATATG
GCAGCAAGAATTATCGCCAAGTTAGCTGCTTGGGGGAAAGAACTGATGGAAGGCAGTGACTTAAATTACT
ATTTCAATTGGATAAAAACTCAGCTGAGTTCACAGAAACTTCGTGGCAGCGGTGTTGCTGTTGAAACAGG
AACAATCTCTTCAAGTGATAGTTCTCAGTATGTGCAGTGTGTTGCTGGCTGTCTGCAGCTGATGCTCCGG
GTCAATGAGTACCGGTTTGCCTGGGTAGAAGCAGATGGAGTGAACTGTATAATGGGCGTTTTGAGTAACA
AGTGTGGTTTTCAACTTCAATACCAAATGATTTTTTCAATATGGCTCCTGGCATTCAGTCCTCAAATGTG
TGAGCACCTTCGTCGCTATAATATCATTCCTGTTCTATCAGACATCCTTCAAGAATCTGTCAAAGAGAAA
GTAACAAGAATCATTCTTGCAGCATTCCGGAATTTCTTAGAAAAATCAACGGAAAGAGAAACTCGCCAAG
AGTATGCTCTGGCTATGATTCAATGCAAAGTACTGAAACAGTTGGAGAATTTGGAGCAGCAGAAGTATGA
TGATGAAGATATCAGTGAAGACATCAAATTTCTTTTGGAAAAACTTGGTGAGAGTGTCCAGGACCTTAGC
TCATTTGATGAATACAGTTCAGAACTTAAATCTGGAAGATTGGAATGGAGCCCTGTACACAAGTCTGAGA
AATTTTGGAGAGAAAATGCCGTGAGGTTGAATGAGAAGAACTATGAACTCTTGAAAATCTTGACAAAACT
TCTGGAGGTATCAGATGATCCACAAGTCTTAGCTGTTGCTGCTCACGATGTTGGAGAATATGTCCGGCAT
TATCCCCGGGGAAAACGGGTTATTGAGCAGCTTGGTGGAAAGCAGTTGGTGATGAACCACATGCACCATG
AAGACCAGCAGGTTCGCTACAATGCTCTTCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGGAATATCT
TGGTAAACAACTACAGTCAGAGCAGCCTCAGACTGCTGCTGCTCGGAGCTGA

Translation (483 aa):
MTKMDIRGAVDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSSEDKQEMLQTEG
SQCAKTFINLMTHISKEQTVQYILTMVDDMLQENHQRVSIFFDYAKRSKSTAWPYFLPMLNRQDPFTVHM
AARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTISSSDSSQYVQCVAGCLQLMLR
VNEYRFAWVEADGVNCIMGVLSNKCGFQLQYQMIFSIWLLAFSPQMCEHLRRYNIIPVLSDILQESVKEK
VTRIILAAFRNFLEKSTERETRQEYALAMIQCKVLKQLENLEQQKYDDEDISEDIKFLLEKLGESVQDLS
SFDEYSSELKSGRLEWSPVHKSEKFWRENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRH
YPRGKRVIEQLGGKQLVMNHMHHEDQQVRYNALLAVQKLMVHNWEYLGKQLQSEQPQTAAARS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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