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Report for CCDS12922.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12922.1 Public Homo sapiens 19 KMT5C 24 110 108 CCDS HistoryNCBI Gene:84787Re-query CCDS DB by CCDS ID:12922.1Re-query CCDS DB by GeneID:84787See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12922.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000255613.8 ENSP00000255613.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000255613.8Link to Ensembl Protein Viewer:ENSP00000255613.3Re-query CCDS DB by Nucleotide ID:ENST00000255613Re-query CCDS DB by Protein ID:ENSP00000255613
Original member Current member NCBI NM_032701.4 NP_116090.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032701.4Link to Protein Sequence:NP_116090.2Re-query CCDS DB by Nucleotide ID:NM_032701Re-query CCDS DB by Protein ID:NP_116090Link to BLAST:NP_116090.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116090.2 462 Q86Y97-1 462 100% 0 0

Chromosomal Locations for CCDS 12922.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 55341937 55342046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55342215 55342380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55342742 55342851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55343680 55343843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55343978 55343997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55346213 55346349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55346500 55346687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55346956 55347449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1389 nt):
ATGGGGCCCGACAGAGTGACAGCACGAGAACTGTGCGAGAACGACGACCTGGCCACCAGCCTCGTCCTGG
ACCCCTACCTCGGTTTCCGCACCCATAAGATGAACGTCAGCCCTGTGCCCCCCCTGCGGCGACAGCAGCA
CCTGCGCTCAGCGCTGGAAACTTTCCTGAGGCAGCGGGACCTGGAGGCTGCGTACCGGGCCCTGACGCTG
GGAGGCTGGACGGCCCGCTACTTCCAGAGCCGGGGCCCGCGGCAGGAGGCTGCCCTCAAGACCCACGTCT
ATCGCTACCTCCGTGCCTTCCTGCCGGAAAGTGGCTTTACCATCCTGCCCTGCACGCGCTACTCCATGGA
GACCAACGGGGCCAAGATCGTGTCCACTCGTGCTTGGAAAAAGAATGAGAAGCTGGAGCTGCTGGTGGGC
TGCATTGCAGAGCTGCGGGAGGCAGATGAGGGGCTGCTGAGGGCCGGTGAGAATGACTTCAGCATCATGT
ACTCAACCCGCAAGCGGAGTGCTCAGCTGTGGCTGGGCCCAGCCGCCTTCATCAACCATGACTGCAAACC
CAACTGCAAGTTTGTGCCTGCAGATGGGAACGCAGCCTGCGTGAAGGTGCTCCGGGACATTGAGCCTGGG
GACGAGGTGACATGCTTCTACGGCGAGGGCTTCTTCGGCGAGAAGAATGAGCACTGTGAATGCCACACCT
GTGAGAGGAAAGGTGAAGGAGCTTTCCGAACCAGGCCTAGGGAGCCCGCGTTGCCACCACGGCCCCTGGA
CAAGTACCAGCTGCGTGAGACCAAGCGGCGGCTGCAGCAAGGCCTGGACAGTGGCAGCCGACAGGGCCTG
CTGGGCCCTCGGGCCTGCGTGCACCCATCCCCGCTGCGCCGGGACCCATTCTGCGCCGCCTGCCAGCCCC
TGCGCCTGCCAGCCTGCAGCGCCCGCCCAGACACCTCACCCCTCTGGCTCCAGTGGCTGCCTCAGCCCCA
GCCCCGAGTGCGGCCCCGGAAGCGCCGACGCCCCCGGCCCCGGAGGGCCCCAGTGCTCTCCACCCACCAC
GCTGCCCGCGTCTCCCTGCACCGATGGGGAGGCTGTGGCCCCCACTGCCGCCTGCGAGGAGAGGCCCTGG
TGGCCCTGGGCCAGCCCCCCCACGCCCGCTGGGCCCCTCAGCAGGACTGGCACTGGGCCCGGCGCTATGG
GCTGCCTTACGTGGTGCGTGTGGACCTTCGTCGCCTGGCCCCAGCCCCACCAGCTACCCCAGCCCCTGCT
GGGACCCCAGGCCCCATCCTGATCCCGAAGCAGGCCCTCGCCTTCGCCCCCTTCTCCCCACCCAAGCGCC
TACGGCTGGTGGTCAGCCACGGCTCCATCGACCTGGATGTCGGCGGTGAAGAGCTGTGA

Translation (462 aa):
MGPDRVTARELCENDDLATSLVLDPYLGFRTHKMNVSPVPPLRRQQHLRSALETFLRQRDLEAAYRALTL
GGWTARYFQSRGPRQEAALKTHVYRYLRAFLPESGFTILPCTRYSMETNGAKIVSTRAWKKNEKLELLVG
CIAELREADEGLLRAGENDFSIMYSTRKRSAQLWLGPAAFINHDCKPNCKFVPADGNAACVKVLRDIEPG
DEVTCFYGEGFFGEKNEHCECHTCERKGEGAFRTRPREPALPPRPLDKYQLRETKRRLQQGLDSGSRQGL
LGPRACVHPSPLRRDPFCAACQPLRLPACSARPDTSPLWLQWLPQPQPRVRPRKRRRPRPRRAPVLSTHH
AARVSLHRWGGCGPHCRLRGEALVALGQPPHARWAPQQDWHWARRYGLPYVVRVDLRRLAPAPPATPAPA
GTPGPILIPKQALAFAPFSPPKRLRLVVSHGSIDLDVGGEEL


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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