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Report for CCDS12848.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12848.1 Public Homo sapiens 19 ZNF432 24 110 108 CCDS HistoryNCBI Gene:9668Re-query CCDS DB by CCDS ID:12848.1Re-query CCDS DB by GeneID:9668See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12848.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000221315.10 ENSP00000221315.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000221315.10Link to Ensembl Protein Viewer:ENSP00000221315.4Re-query CCDS DB by Nucleotide ID:ENST00000221315Re-query CCDS DB by Protein ID:ENSP00000221315
Original member Current member EBI ENST00000594154.5 ENSP00000470488.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000594154.5Link to Ensembl Protein Viewer:ENSP00000470488.1Re-query CCDS DB by Nucleotide ID:ENST00000594154Re-query CCDS DB by Protein ID:ENSP00000470488
Original member Current member NCBI NM_001322284.2 NP_001309213.1 Accepted alive Link to Nucleotide Sequence:NM_001322284.2Link to Protein Sequence:NP_001309213.1Re-query CCDS DB by Nucleotide ID:NM_001322284Re-query CCDS DB by Protein ID:NP_001309213Link to BLAST:NP_001309213.1
Original member Current member NCBI NM_001322285.1 NP_001309214.1 Accepted alive Link to Nucleotide Sequence:NM_001322285.1Link to Protein Sequence:NP_001309214.1Re-query CCDS DB by Nucleotide ID:NM_001322285Re-query CCDS DB by Protein ID:NP_001309214Link to BLAST:NP_001309214.1
Original member Current member NCBI NM_014650.4 NP_055465.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014650.4Link to Protein Sequence:NP_055465.1Re-query CCDS DB by Nucleotide ID:NM_014650Re-query CCDS DB by Protein ID:NP_055465Link to BLAST:NP_055465.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001309213.1 652 O94892 652 100% 0 0
NP_001309214.1 652 O94892 652 100% 0 0
NP_055465.1 652 O94892 652 100% 0 0

Chromosomal Locations for CCDS 12848.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 52033720 52035440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52040488 52040583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52041480 52041606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52046854 52046868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1959 nt):
ATGATCAATGCCCAGGAATTGCTGACACTGGAGGATGTTACTGTGGAGTTCACCTGGGAGGAGTGGCAGC
TCCTGGGCCCTTTTCAGAAGGATTTGTACCGGGATGTGATGTTGGAGATCTACAGCAACCTGCTATCAAT
GGGTTATCAAGTCAGCAAACCAGATGCACTCTCCAAGTTGGAACGAGGAGAAGAACCATGGACAATGGAA
GATGAAAGGCACAGTCGAATCTGTCCAGAAAACAACGAAGTTGATGATCATCTGCAGGATCACTTGGAAA
ATCAAAGGATGCTGAAGAGTGTGGAACAATACCATGAACATAATGCATTTGGAAATACTGCCTCTCAAAC
CAAAAGCCTTTGTCTTTTCAGGGAAAATCATGATACATTTGAGTTATATATAAAAACTTTGAAATCAAAT
TTAAGTTTAGTCAACCAGAACAAAAGCTGTGAAATTAACAACTCTACTAAATTTAGTGGAGATGGGAAAT
CATTTCTTCATGGTAACTATGAAGAACTTTATTCTGCAGCTAAATTCTCTGTAAGTACAAAAGCCAATAG
CACTAAATCCCAAGTCAGTAAGCATCAGAGAACTCATGAAATAGAAAAAAACCACGTATGCAGTGAATGT
GGGAAAGCGTTTGTCAAGAAGTCTCAGCTCACTGATCATGAGAGAGTTCATACAGGAGAAAAACCTTATG
GATGTACTTTGTGTGCAAAAGTGTTCTCCAGAAAGTCCAGGCTAAATGAACATCAAAGAATTCATAAAAG
AGAGAAATCTTTTATATGCAGTGAATGTGGAAAAGTCTTCACTATGAAGAGCCGTCTGATTGAACATCAG
CGAACTCATACTGGAGAGAAACCCTACATATGCAATGAATGTGGAAAAGGCTTCCCAGGCAAGCGTAATC
TCATTGTACATCAGCGAAATCATACTGGAGAGAAATCCTATATATGTAGTGAATGTGGAAAAGGCTTCAC
TGGGAAGAGCATGCTTATTATACATCAGCGAACTCATACAGGAGAGAAGCCCTACATCTGTAGTGAATGT
GGGAAAGGCTTCACCACAAAACACTATGTCATCATACATCAACGAAATCATACAGGAGAGAAACCATATA
TATGCAATGAATGTGGGAAAGGCTTCACCATGAAGAGCCGTATGATCGAACATCAACGAACTCATACAGG
AGAGAAACCCTACATATGCAGTGAATGTGGAAAAGGCTTTCCCAGGAAGAGTAATCTTATTGTACATCAG
AGAAATCATACAGTAGAGAAGTCATATCTATGTAGTGAATGTGGAAAAGGTTTTACTGTGAAAAGCATGC
TCATCATACATCAGCGAACTCATACAGGAGAGAAGCCCTACACATGCAGTGAATGTGGGAAAGGCTTCCC
CTTGAAGAGTCGGCTGATTGTACATCAGCGAACTCATACTGGAGAGAAACCTTACAGGTGCAGTGAATGT
GGGAAAGGTTTCATTGTGAATAGCGGACTGATGTTACATCAGCGAACTCATACTGGAGAGAAACCGTACA
TATGCAATGAATGTGGAAAAGGTTTTGCCTTTAAGAGCAATCTTGTTGTACACCAGCGAACTCATACTGG
AGAGAAACCCTTTATGTGCAGTGAATGTGGAAAAGGCTTCACCATGAAACGCTATCTCATTGTACATCAG
CAAATTCATACAGAAGAGAAATCTTGTATATGTAGTGAATGTGGAAGAGGCTTTGCCAAGGAAACAGAGC
TTGCTTTACATAAGCAAGTTCATACTGGAGAAAAACCTTATGGATGTAATGAATGTGGTAAAGGCTTCAC
TATGAAGAGCCGTCTAATTGTTCATCAACGAACTCATACAGGAGAGAAACCCTTTGTATGCAGTGAATGT
AGAAAAGCCTTCTCCTCAAAGAGAAATCTCATTGTACATCAGCGAACTCATAATGGAAACAAACCCTGA

Translation (652 aa):
MINAQELLTLEDVTVEFTWEEWQLLGPFQKDLYRDVMLEIYSNLLSMGYQVSKPDALSKLERGEEPWTME
DERHSRICPENNEVDDHLQDHLENQRMLKSVEQYHEHNAFGNTASQTKSLCLFRENHDTFELYIKTLKSN
LSLVNQNKSCEINNSTKFSGDGKSFLHGNYEELYSAAKFSVSTKANSTKSQVSKHQRTHEIEKNHVCSEC
GKAFVKKSQLTDHERVHTGEKPYGCTLCAKVFSRKSRLNEHQRIHKREKSFICSECGKVFTMKSRLIEHQ
RTHTGEKPYICNECGKGFPGKRNLIVHQRNHTGEKSYICSECGKGFTGKSMLIIHQRTHTGEKPYICSEC
GKGFTTKHYVIIHQRNHTGEKPYICNECGKGFTMKSRMIEHQRTHTGEKPYICSECGKGFPRKSNLIVHQ
RNHTVEKSYLCSECGKGFTVKSMLIIHQRTHTGEKPYTCSECGKGFPLKSRLIVHQRTHTGEKPYRCSEC
GKGFIVNSGLMLHQRTHTGEKPYICNECGKGFAFKSNLVVHQRTHTGEKPFMCSECGKGFTMKRYLIVHQ
QIHTEEKSCICSECGRGFAKETELALHKQVHTGEKPYGCNECGKGFTMKSRLIVHQRTHTGEKPFVCSEC
RKAFSSKRNLIVHQRTHNGNKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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