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Report for CCDS1256.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1256.1 Public Homo sapiens 1 ILDR2 24 110 108 CCDS HistoryNCBI Gene:387597Re-query CCDS DB by CCDS ID:1256.1Re-query CCDS DB by GeneID:387597See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1256.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000271417.8 ENSP00000271417.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000271417.8Link to Ensembl Protein Viewer:ENSP00000271417.2Re-query CCDS DB by Nucleotide ID:ENST00000271417Re-query CCDS DB by Protein ID:ENSP00000271417
Original member Current member NCBI NM_199351.3 NP_955383.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_199351.3Link to Protein Sequence:NP_955383.1Re-query CCDS DB by Nucleotide ID:NM_199351Re-query CCDS DB by Protein ID:NP_955383Link to BLAST:NP_955383.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_955383.1 639 Q71H61 639 100% 0 0

Chromosomal Locations for CCDS 1256.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 166919355 166919390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 166920707 166921379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 166922593 166922809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 166927067 166927180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 166935301 166935477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 166936591 166936737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 166939514 166939570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 166956733 166956852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 166957769 166958101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 166975223 166975268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1920 nt):
ATGGATAGGGTCTTGCTGAGGTGGATTTCTCTCTTCTGGCTAACAGCCATGGTCGAAGGCCTTCAGGTCA
CAGTGCCCGACAAGAAGAAGGTGGCCATGCTCTTCCAGCCCACTGTGCTTCGCTGCCACTTCTCAACATC
CTCCCATCAGCCTGCAGTTGTGCAGTGGAAGTTCAAGTCCTACTGCCAGGATCGCATGGGAGAATCCTTG
GGCATGTCCTCTACCCGGGCCCAATCTCTCAGCAAGAGAAACCTGGAATGGGACCCCTACTTGGATTGTT
TGGACAGCAGGAGGACTGTTCGAGTAGTAGCTTCAAAACAGGGCTCGACTGTCACCCTGGGAGATTTCTA
CAGGGGCAGAGAGATCACGATTGTTCATGATGCAGATCTTCAAATTGGAAAGCTTATGTGGGGAGACAGC
GGACTCTATTACTGTATTATCACCACCCCAGATGACCTGGAGGGGAAAAATGAGGACTCAGTGGAACTGC
TGGTGTTGGGCAGGACAGGGCTGCTTGCTGATCTCTTGCCCAGTTTTGCTGTGGAGATTATGCCAGAGTG
GGTGTTTGTTGGCCTGGTGCTCCTGGGCGTCTTCCTCTTCTTCGTCCTGGTGGGGATCTGCTGGTGCCAG
TGCTGCCCTCACAGCTGCTGCTGCTATGTCCGCTGCCCATGCTGCCCAGATTCCTGCTGCTGCCCTCAAG
CCTTGTATGAAGCAGGGAAAGCAGCAAAGGCCGGGTACCCTCCCTCTGTCTCCGGTGTCCCCGGCCCTTA
CTCCATCCCCTCTGTCCCTTTGGGAGGAGCCCCCTCATCTGGCATGCTGATGGACAAGCCGCATCCACCT
CCCTTGGCACCAAGTGACTCCACTGGAGGAAGCCACAGTGTTCGCAAAGGTTACCGGATCCAGGCTGACA
AAGAGAGAGACTCCATGAAGGTCCTGTACTATGTTGAGAAGGAGCTGGCTCAGTTTGATCCAGCCAGAAG
GATGAGAGGCAGATATAACAACACCATCTCAGAACTCAGCTCCCTACATGAGGAGGACAGCAATTTCCGC
CAGTCTTTCCATCAGATGAGAAGCAAGCAGTTCCCTGTGTCTGGGGACTTGGAGAGCAATCCTGACTATT
GGTCAGGTGTCATGGGAGGCAGCAGTGGGGCAAGCCGCGGGCCCTCAGCCATGGAGTATAACAAAGAGGA
TCGAGAGAGCTTCAGGCACAGCCAGCCGCGCTCCAAGTCGGAGATGCTGTCGCGGAAGAACTTCGCCACG
GGGGTGCCGGCCGTTTCCATGGACGAGCTGGCGGCCTTCGCTGACTCCTACGGCCAGCGGCCCCGCCGGG
CAGACGGCAACAGTCACGAGGCGCGGGGCGGGAGCCGCTTCGAGCGCTCGGAGTCGCGGGCGCACAGCGG
CTTCTACCAGGACGACTCCTTGGAGGAGTACTACGGTCAGCGCAGCCGCAGCCGCGAGCCCCTGACCGAT
GCTGACCGCGGCTGGGCCTTCAGCCCCGCGCGCCGCAGACCCGCCGAGGACGCGCACCTGCCGCGGCTGG
TGAGCCGCACGCCAGGCACCGCACCCAAATACGACCACTCGTACCTGGGCAGCGCGCGGGAGCGCCAGGC
GCGGCCCGAGGGCGCCAGCCGCGGTGGCAGCCTGGAGACGCCATCCAAGCGGAGCGCGCAGCTCGGCCCG
CGCAGCGCCTCCTACTACGCTTGGTCGCCGCCCGGCACCTACAAGGCCGGCTCGTCGCAGGACGACCAGG
AGGACGCGTCCGACGACGCGCTGCCGCCCTACAGCGAGCTGGAGCTGACCCGCGGCCCGTCCTACCGCGG
CCGCGACCTGCCCTACCACAGCAACTCGGAGAAGAAGAGGAAAAAGGAGCCCGCCAAGAAAACCAATGAC
TTTCCAACCAGGATGTCCCTTGTGGTCTGA

Translation (639 aa):
MDRVLLRWISLFWLTAMVEGLQVTVPDKKKVAMLFQPTVLRCHFSTSSHQPAVVQWKFKSYCQDRMGESL
GMSSTRAQSLSKRNLEWDPYLDCLDSRRTVRVVASKQGSTVTLGDFYRGREITIVHDADLQIGKLMWGDS
GLYYCIITTPDDLEGKNEDSVELLVLGRTGLLADLLPSFAVEIMPEWVFVGLVLLGVFLFFVLVGICWCQ
CCPHSCCCYVRCPCCPDSCCCPQALYEAGKAAKAGYPPSVSGVPGPYSIPSVPLGGAPSSGMLMDKPHPP
PLAPSDSTGGSHSVRKGYRIQADKERDSMKVLYYVEKELAQFDPARRMRGRYNNTISELSSLHEEDSNFR
QSFHQMRSKQFPVSGDLESNPDYWSGVMGGSSGASRGPSAMEYNKEDRESFRHSQPRSKSEMLSRKNFAT
GVPAVSMDELAAFADSYGQRPRRADGNSHEARGGSRFERSESRAHSGFYQDDSLEEYYGQRSRSREPLTD
ADRGWAFSPARRRPAEDAHLPRLVSRTPGTAPKYDHSYLGSARERQARPEGASRGGSLETPSKRSAQLGP
RSASYYAWSPPGTYKAGSSQDDQEDASDDALPPYSELELTRGPSYRGRDLPYHSNSEKKRKKEPAKKTND
FPTRMSLVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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