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Report for CCDS12154.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12154.1 Public Homo sapiens 19 FUT5 24 110 108 CCDS HistoryNCBI Gene:2527Re-query CCDS DB by CCDS ID:12154.1Re-query CCDS DB by GeneID:2527See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12154.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000252675.6 ENSP00000252675.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000252675.6Link to Ensembl Protein Viewer:ENSP00000252675.5Re-query CCDS DB by Nucleotide ID:ENST00000252675Re-query CCDS DB by Protein ID:ENSP00000252675
Original member Current member EBI ENST00000588525.1 ENSP00000466880.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000588525.1Link to Ensembl Protein Viewer:ENSP00000466880.1Re-query CCDS DB by Nucleotide ID:ENST00000588525Re-query CCDS DB by Protein ID:ENSP00000466880
Original member Current member NCBI NM_002034.2 NP_002025.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002034.2Link to Protein Sequence:NP_002025.2Re-query CCDS DB by Nucleotide ID:NM_002034Re-query CCDS DB by Protein ID:NP_002025Link to BLAST:NP_002025.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002025.2 374 Q11128 374 100% 0 0

Chromosomal Locations for CCDS 12154.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 5866601 5867725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1125 nt):
ATGGATCCCCTGGGCCCAGCCAAGCCACAGTGGCTGTGGCGCCGCTGTCTGGCCGGGCTGCTGTTTCAGC
TGCTGGTGGCTGTGTGTTTCTTCTCCTACCTGCGTGTGTCCCGAGACGATGCCACTGGATCCCCTAGGCC
AGGGCTTATGGCAGTGGAACCTGTCACCGGGGCTCCCAATGGGTCCCGCTGCCAGGACAGCATGGCGACC
CCTGCCCACCCCACCCTACTGATCCTGCTGTGGACGTGGCCTTTTAACACACCCGTGGCTCTGCCCCGCT
GCTCAGAGATGGTGCCCGGCGCGGCCGACTGCAACATCACTGCCGACTCCAGTGTGTACCCACAGGCAGA
CGCGGTCATCGTGCACCACTGGGATATCATGTACAACCCCAGTGCCAACCTCCCGCCCCCCACCAGGCCG
CAGGGGCAGCGCTGGATCTGGTTCAGCATGGAGTCCCCCAGCAACTGCCGGCACCTGGAAGCCCTGGACG
GATACTTCAATCTCACCATGTCCTACCGCAGCGACTCCGACATCTTCACGCCCTACGGCTGGCTGGAGCC
GTGGTCCGGCCAGCCTGCCCACCCACCGCTCAACCTCTCGGCCAAGACCGAGCTGGTGGCCTGGGCGGTG
TCCAACTGGAAGCCGGACTCGGCCAGGGTGCGCTACTACCAGAGCCTGCAGGCTCATCTCAAGGTGGACG
TGTACGGACGCTCCCACAAGCCCCTGCCCAAGGGGACCATGATGGAGACGCTGTCCCGGTACAAGTTCTA
TCTGGCCTTCGAGAACTCCTTGCACCCCGACTACATCACCGAGAAGCTGTGGAGGAACGCCCTGGAGGCC
TGGGCCGTGCCCGTGGTGCTGGGCCCCAGCAGAAGCAACTACGAGAGGTTCCTGCCACCCGACGCCTTCA
TCCACGTGGACGACTTCCAGAGCCCCAAGGACCTGGCCCGGTACCTGCAGGAGCTGGACAAGGACCACGC
CCGCTACCTGAGCTACTTTCACTGGCGGGAGACGCTGCGGCCTCGCTCCTTCAGCTGGGCACTGGCTTTC
TGCAAGGCCTGCTGGAAGCTGCAGCAGGAATCTAGGTACCAGACGGTGCGCAGCATAGCGGCTTGGTTCA
CCTGA

Translation (374 aa):
MDPLGPAKPQWLWRRCLAGLLFQLLVAVCFFSYLRVSRDDATGSPRPGLMAVEPVTGAPNGSRCQDSMAT
PAHPTLLILLWTWPFNTPVALPRCSEMVPGAADCNITADSSVYPQADAVIVHHWDIMYNPSANLPPPTRP
QGQRWIWFSMESPSNCRHLEALDGYFNLTMSYRSDSDIFTPYGWLEPWSGQPAHPPLNLSAKTELVAWAV
SNWKPDSARVRYYQSLQAHLKVDVYGRSHKPLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEA
WAVPVVLGPSRSNYERFLPPDAFIHVDDFQSPKDLARYLQELDKDHARYLSYFHWRETLRPRSFSWALAF
CKACWKLQQESRYQTVRSIAAWFT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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