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Report for CCDS11580.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11580.1 Public Homo sapiens 17 NME2 24 110 108 CCDS HistoryNCBI Gene:4831Re-query CCDS DB by CCDS ID:11580.1Re-query CCDS DB by GeneID:4831See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11580.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393190.4 ENSP00000376886.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393190.4Link to Ensembl Protein Viewer:ENSP00000376886.1Re-query CCDS DB by Nucleotide ID:ENST00000393190Re-query CCDS DB by Protein ID:ENSP00000376886
Original member Current member EBI ENST00000512737.6 ENSP00000421064.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000512737.6Link to Ensembl Protein Viewer:ENSP00000421064.1Re-query CCDS DB by Nucleotide ID:ENST00000512737Re-query CCDS DB by Protein ID:ENSP00000421064
Original member Current member EBI ENST00000513177.5 ENSP00000425581.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000513177.5Link to Ensembl Protein Viewer:ENSP00000425581.1Re-query CCDS DB by Nucleotide ID:ENST00000513177Re-query CCDS DB by Protein ID:ENSP00000425581
Original member Current member EBI ENST00000503064.5 ENSP00000426901.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000503064.5Link to Ensembl Protein Viewer:ENSP00000426901.1Re-query CCDS DB by Nucleotide ID:ENST00000503064Re-query CCDS DB by Protein ID:ENSP00000426901
Original member Current member EBI ENST00000514264.6 ENSP00000426976.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000514264.6Link to Ensembl Protein Viewer:ENSP00000426976.2Re-query CCDS DB by Nucleotide ID:ENST00000514264Re-query CCDS DB by Protein ID:ENSP00000426976
Original member Current member NCBI NM_001018137.3 NP_001018147.1 Accepted alive Link to Nucleotide Sequence:NM_001018137.3Link to Protein Sequence:NP_001018147.1Re-query CCDS DB by Nucleotide ID:NM_001018137Re-query CCDS DB by Protein ID:NP_001018147Link to BLAST:NP_001018147.1
Original member Current member NCBI NM_001018138.1 NP_001018148.1 Accepted alive Link to Nucleotide Sequence:NM_001018138.1Link to Protein Sequence:NP_001018148.1Re-query CCDS DB by Nucleotide ID:NM_001018138Re-query CCDS DB by Protein ID:NP_001018148Link to BLAST:NP_001018148.1
Original member Current member NCBI NM_001018139.2 NP_001018149.1 Accepted alive Link to Nucleotide Sequence:NM_001018139.2Link to Protein Sequence:NP_001018149.1Re-query CCDS DB by Nucleotide ID:NM_001018139Re-query CCDS DB by Protein ID:NP_001018149Link to BLAST:NP_001018149.1
Original member Current member NCBI NM_002512.4 NP_002503.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002512.4Link to Protein Sequence:NP_002503.1Re-query CCDS DB by Nucleotide ID:NM_002512Re-query CCDS DB by Protein ID:NP_002503Link to BLAST:NP_002503.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001018147.1 152 P22392-1 152 100% 0 0
NP_001018148.1 152 P22392-1 152 100% 0 0
NP_001018149.1 152 P22392-1 152 100% 0 0
NP_002503.1 152 P22392-1 152 100% 0 0

Chromosomal Locations for CCDS 11580.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 51166831 51166956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 51168242 51168343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 51169937 51170049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 51171487 51171604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (459 nt):
ATGGCCAACCTGGAGCGCACCTTCATCGCCATCAAGCCGGACGGCGTGCAGCGCGGCCTGGTGGGCGAGA
TCATCAAGCGCTTCGAGCAGAAGGGATTCCGCCTCGTGGCCATGAAGTTCCTCCGGGCCTCTGAAGAACA
CCTGAAGCAGCACTACATTGACCTGAAAGACCGACCATTCTTCCCTGGGCTGGTGAAGTACATGAACTCA
GGGCCGGTTGTGGCCATGGTCTGGGAGGGGCTGAACGTGGTGAAGACAGGCCGAGTGATGCTTGGGGAGA
CCAATCCAGCAGATTCAAAGCCAGGCACCATTCGTGGGGACTTCTGCATTCAGGTTGGCAGGAACATCAT
TCATGGCAGTGATTCAGTAAAAAGTGCTGAAAAAGAAATCAGCCTATGGTTTAAGCCTGAAGAACTGGTT
GACTACAAGTCTTGTGCTCATGACTGGGTCTATGAATAA

Translation (152 aa):
MANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNS
GPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELV
DYKSCAHDWVYE


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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