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Report for CCDS11210.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11210.1 Public Homo sapiens 17 ALDH3A2 24 110 108 CCDS HistoryNCBI Gene:224Re-query CCDS DB by CCDS ID:11210.1Re-query CCDS DB by GeneID:224See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11210.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000176643.11 ENSP00000176643.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000176643.11Link to Ensembl Protein Viewer:ENSP00000176643.6Re-query CCDS DB by Nucleotide ID:ENST00000176643Re-query CCDS DB by Protein ID:ENSP00000176643
Original member Current member EBI ENST00000581518.6 ENSP00000461916.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000581518.6Link to Ensembl Protein Viewer:ENSP00000461916.2Re-query CCDS DB by Nucleotide ID:ENST00000581518Re-query CCDS DB by Protein ID:ENSP00000461916
Original member Current member EBI ENST00000579855.5 ENSP00000463637.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000579855.5Link to Ensembl Protein Viewer:ENSP00000463637.1Re-query CCDS DB by Nucleotide ID:ENST00000579855Re-query CCDS DB by Protein ID:ENSP00000463637
Original member Current member EBI ENST00000672357.1 ENSP00000500092.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000672357.1Link to Ensembl Protein Viewer:ENSP00000500092.1Re-query CCDS DB by Nucleotide ID:ENST00000672357Re-query CCDS DB by Protein ID:ENSP00000500092
Original member Current member NCBI NM_000382.3 NP_000373.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000382.3Link to Protein Sequence:NP_000373.1Re-query CCDS DB by Nucleotide ID:NM_000382Re-query CCDS DB by Protein ID:NP_000373Link to BLAST:NP_000373.1
Original member Current member NCBI NM_001369138.2 NP_001356067.1 Accepted alive Link to Nucleotide Sequence:NM_001369138.2Link to Protein Sequence:NP_001356067.1Re-query CCDS DB by Nucleotide ID:NM_001369138Re-query CCDS DB by Protein ID:NP_001356067Link to BLAST:NP_001356067.1
Original member Current member NCBI NM_001369139.1 NP_001356068.1 Accepted alive Link to Nucleotide Sequence:NM_001369139.1Link to Protein Sequence:NP_001356068.1Re-query CCDS DB by Nucleotide ID:NM_001369139Re-query CCDS DB by Protein ID:NP_001356068Link to BLAST:NP_001356068.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000373.1 485 P51648-1 485 100% 0 0
NP_001356067.1 485 P51648-1 485 100% 0 0
NP_001356068.1 485 P51648-1 485 100% 0 0

Chromosomal Locations for CCDS 11210.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 19648972 19649124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19651547 19651778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19652547 19652632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19656366 19656574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19657745 19657862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19661127 19661268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19663333 19663499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19664948 19665047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19671721 19671956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19675558 19675572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1458 nt):
ATGGAGCTCGAAGTCCGGCGGGTCCGACAGGCGTTCCTGTCCGGCCGGTCGCGACCTCTGCGGTTTCGGC
TGCAGCAGCTGGAGGCCCTGCGGAGGATGGTGCAGGAGCGCGAGAAGGATATCCTGACGGCCATCGCCGC
CGACCTGTGCAAGAGTGAATTCAATGTGTACAGTCAGGAAGTCATTACTGTCCTTGGGGAAATTGATTTT
ATGCTTGAGAATCTTCCTGAATGGGTTACTGCTAAACCAGTTAAGAAGAACGTGCTCACCATGCTGGATG
AGGCCTATATTCAGCCACAGCCTCTGGGAGTGGTGCTGATAATCGGAGCTTGGAATTACCCCTTCGTTCT
CACCATTCAGCCACTGATAGGAGCCATCGCTGCAGGAAATGCTGTGATTATAAAGCCTTCTGAACTGAGT
GAAAATACAGCCAAGATCTTGGCAAAGCTTCTCCCTCAGTATTTAGACCAGGATCTCTATATTGTTATTA
ATGGTGGTGTTGAGGAAACCACGGAGCTCCTGAAGCAGCGATTTGACCACATTTTCTATACGGGAAACAC
TGCGGTTGGCAAAATTGTCATGGAAGCTGCTGCCAAGCATCTGACCCCTGTGACTCTTGAACTGGGAGGG
AAAAGTCCATGTTATATTGATAAAGATTGTGACCTGGACATTGTTTGCAGACGCATAACCTGGGGAAAAT
ACATGAATTGTGGCCAAACCTGCATTGCACCCGACTATATTCTCTGTGAAGCATCCCTCCAAAATCAAAT
TGTATGGAAGATTAAGGAAACAGTGAAGGAATTTTATGGAGAAAATATAAAAGAGTCTCCTGATTATGAA
AGGATCATCAATCTTCGTCATTTTAAGAGGATACTAAGTTTGCTTGAAGGACAAAAGATAGCTTTTGGTG
GGGAGACTGATGAGGCCACACGCTACATAGCCCCAACAGTACTTACCGATGTTGATCCTAAAACCAAGGT
GATGCAAGAAGAAATTTTTGGACCAATTCTTCCAATAGTGCCTGTGAAAAATGTAGATGAGGCCATAAAT
TTCATAAATGAACGTGAAAAGCCTCTGGCTCTTTATGTATTTTCGCATAACCATAAGCTCATCAAACGGA
TGATTGATGAGACATCCAGTGGAGGTGTCACAGGCAATGACGTCATTATGCACTTCACGCTCAACTCTTT
CCCATTTGGAGGAGTGGGTTCCAGTGGGATGGGAGCTTATCACGGAAAACATAGTTTTGATACTTTTTCT
CATCAGCGTCCCTGTTTATTAAAAAGTTTAAAGAGAGAAGGTGCTAACAAACTCAGATATCCTCCCAACA
GCCAGTCAAAGGTGGATTGGGGAAAATTTTTTCTCTTGAAACGGTTCAACAAAGAAAAACTCGGTCTCCT
GTTGCTCACTTTCCTGGGTATTGTAGCCGCTGTGCTTGTCAAGGCAGAATATTACTGA

Translation (485 aa):
MELEVRRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILTAIAADLCKSEFNVYSQEVITVLGEIDF
MLENLPEWVTAKPVKKNVLTMLDEAYIQPQPLGVVLIIGAWNYPFVLTIQPLIGAIAAGNAVIIKPSELS
ENTAKILAKLLPQYLDQDLYIVINGGVEETTELLKQRFDHIFYTGNTAVGKIVMEAAAKHLTPVTLELGG
KSPCYIDKDCDLDIVCRRITWGKYMNCGQTCIAPDYILCEASLQNQIVWKIKETVKEFYGENIKESPDYE
RIINLRHFKRILSLLEGQKIAFGGETDEATRYIAPTVLTDVDPKTKVMQEEIFGPILPIVPVKNVDEAIN
FINEREKPLALYVFSHNHKLIKRMIDETSSGGVTGNDVIMHFTLNSFPFGGVGSSGMGAYHGKHSFDTFS
HQRPCLLKSLKREGANKLRYPPNSQSKVDWGKFFLLKRFNKEKLGLLLLTFLGIVAAVLVKAEYY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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