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Report for CCDS11068.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11068.1 Public Homo sapiens 17 ZNF232 24 110 108 CCDS HistoryNCBI Gene:7775Re-query CCDS DB by CCDS ID:11068.1Re-query CCDS DB by GeneID:7775See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11068.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000250076.8 ENSP00000250076.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000250076.8Link to Ensembl Protein Viewer:ENSP00000250076.3Re-query CCDS DB by Nucleotide ID:ENST00000250076Re-query CCDS DB by Protein ID:ENSP00000250076
Original member Current member NCBI NM_014519.6 NP_055334.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014519.6Link to Protein Sequence:NP_055334.2Re-query CCDS DB by Nucleotide ID:NM_014519Re-query CCDS DB by Protein ID:NP_055334Link to BLAST:NP_055334.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055334.2 444 Q9UNY5-1 444 100% 0 0

Chromosomal Locations for CCDS 11068.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 5105824 5106533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5108926 5109052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5109394 5109868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5111800 5111822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1335 nt):
ATGGAACCTCCTGGTCCTGTGAGGGGGCCCTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAG
TGCAGACTAGGATGGCTGTATCACTAACAGCAGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACAAGA
GAAGATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGACCAGGCTACCTGGGAAC
CACTCTACCAGTCAAGAGATCTTCCGCCAACGCTTCAGGCATCTCCGCTACCAGGAGACTCCTGGTCCCC
GGGAGGCCTTGAGCCAACTACGAGTACTCTGCTGTGAGTGGCTGAGGCCAGAGAAACACACGAAGGAGCA
GATCCTGGAGTTCCTGGTGCTGGAACAATTCTTGACCATCCTGCCTGAGGAGCTCCAATCCTGGGTGCGG
GGACATCACCCTAAGAGTGGAGAGGAGGCTGTGACTGTGCTGGAGGATTTAGAGAAAGGACTTGAACCAG
AGCCGCAGGTCCCAGGCCCTGCACATGGACCTGCACAGGAAGAGCCATGGGAGAAGAAGGAATCTCTGGG
AGCAGCCCAGGAAGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGAACAG
GTATATTTACATTTTCTGTCAGTTGTTACAGAAGATGGCCCAGAGCCCAAGGACAAAGGATCATTGCCAC
AACCACCCATTACTGAAGTGGAATCACAGGTGTTCTCAGAAAAACTTGCTACTGACACCTCTACATTTGA
AGCTACCTCTGAGGGTACCTTAGAACTGCAGCAGAGAAATCCCAAAGCGGAGAGACTGAGGTGGTCCCCT
GCCCAGGAGGAAAGTTTCAGGCAGATGGTTGTCATCCATAAGGAAATTCCCACAGGGAAGAAAGACCATG
AATGTAGTGAATGTGGTAAAACCTTCATTTATAACTCACATCTTGTTGTCCACCAGAGAGTTCATTCTGG
AGAGAAACCCTATAAGTGTAGTGACTGTGGGAAAACTTTCAAACAGAGCTCAAACCTCGGTCAGCATCAG
AGAATTCATACAGGAGAGAAACCCTTCGAATGTAATGAATGTGGGAAGGCCTTCAGATGGGGTGCTCATC
TTGTTCAGCATCAGAGGATTCACTCAGGAGAGAAGCCCTATGAGTGTAATGAGTGTGGGAAGGCCTTTAG
TCAAAGCTCATATCTAAGTCAGCATCGGAGAATTCACAGTGGAGAGAAACCTTTTATATGTAAAGAATGT
GGGAAAGCTTATGGATGGTGCTCAGAGCTCATTAGACATCGGAGAGTTCATGCCAGAAAAGAGCCTTCCC
ATTGA

Translation (444 aa):
MEPPGPVRGPLQDSSWYEPSAELVQTRMAVSLTAAETLALQGTQGQEKMMMMGPKEEEQSCEYETRLPGN
HSTSQEIFRQRFRHLRYQETPGPREALSQLRVLCCEWLRPEKHTKEQILEFLVLEQFLTILPEELQSWVR
GHHPKSGEEAVTVLEDLEKGLEPEPQVPGPAHGPAQEEPWEKKESLGAAQEALSIQLQPKETQPFPKSEQ
VYLHFLSVVTEDGPEPKDKGSLPQPPITEVESQVFSEKLATDTSTFEATSEGTLELQQRNPKAERLRWSP
AQEESFRQMVVIHKEIPTGKKDHECSECGKTFIYNSHLVVHQRVHSGEKPYKCSDCGKTFKQSSNLGQHQ
RIHTGEKPFECNECGKAFRWGAHLVQHQRIHSGEKPYECNECGKAFSQSSYLSQHRRIHSGEKPFICKEC
GKAYGWCSELIRHRRVHARKEPSH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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