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Report for CCDS11047.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11047.1 Public Homo sapiens 17 GGT6 24 110 108 CCDS HistoryNCBI Gene:124975Re-query CCDS DB by CCDS ID:11047.1Re-query CCDS DB by GeneID:124975See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11047.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301395.7 ENSP00000301395.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000301395.7Link to Ensembl Protein Viewer:ENSP00000301395.3Re-query CCDS DB by Nucleotide ID:ENST00000301395Re-query CCDS DB by Protein ID:ENSP00000301395
Original member Current member NCBI NM_153338.4 NP_699169.2 Accepted alive Link to Nucleotide Sequence:NM_153338.4Link to Protein Sequence:NP_699169.2Re-query CCDS DB by Nucleotide ID:NM_153338Re-query CCDS DB by Protein ID:NP_699169Link to BLAST:NP_699169.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_699169.2 461 Q6P531-2 461 100% 0 0

Chromosomal Locations for CCDS 11047.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 4558015 4559057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4559558 4559760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4560382 4560521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1386 nt):
ATGGAGCGGGCAGAAGAGCCCGTGGTCTATCAGAAGCTGCTGCCCTGGGAGCCAAGCTTGGAGTCGGAGG
AGGAAGTGGAGGAGGAGGAGACATCAGAGGCGCTGGTTCTAAACCCCCGGAGGCACCAGGACTCTTCCAG
GAACAAGGCTGGCGGGCTGCCCGGAACCTGGGCCCGTGTAGTGGCAGCCCTGCTGCTGCTGGCTGTTGGC
TGCTCCCTGGCTGTGAGGCAGCTCCAGAATCAGGGCAGGTCGACAGGAAGCTTGGGCTCTGTGGCCCCTC
CACCCGGCGGACACTCCCACGGCCCTGGCGTATACCACCACGGTGCCATCATCAGCCCTGCAGGTGCCAT
GTTTTGGGGCCTCTTCCACGATAGCTCCTCAGGCAATTCCACGGCCCTGACATCAGGCCCAGCACAGACC
CTGGCCCCCGGCCTGGGGCTGCCCGCGGCTCTGCCCACCCTGCACCTGCTGCATGCACGCTTCGGCCGCC
TGCCCTGGCCACGCCTGCTAGTGGGCCCCACCACGCTGGCTCAGGAGGGCTTCCTGGTGGACACACCCCT
GGCAAGGGCTCTGGTGGCTCGGGGCACAGAAGGCCTCTGTCCACTACTTTGCCATGCTGATGGGACACCC
CTGGGCGCTGGGGCCCGAGCCACCAACCCACAACTGGCAGCTGTGCTTCGCAGCGCAGCCCTCGCTCCCA
CCTCAGACCTTGCTGGGGATGCTCTACTGAGTCTACTGGCGGGAGACCTGGGGGTGGAGGTGCCCTCGGC
TGTGCCCAGGCCCACTTTGGAACCAGCAGAGCAGCTACCTGTGCCCCAGGGCATCCTGTTCACCACCCCC
AGTCCCTCAGCTGGCCCAGAACTGCTGGCACTGTTGGAGGCAGCCCTGCGCTCCGGGGCGCCCATCCCTG
ACCCCTGCCCACCGTTCCTGCAGACTGCTGTGAGCCCCGAGAGCAGTGCCCTGGCCGCCGTGGACAGCAG
CGGCTCTGTGCTCCTTCTCACCTCCTCGCTCAACTGCTCCTTTGGCTCTGCACACCTGTCCCCAAGCACT
GGGGTTCTGCTCAGCAACCTGGTGGCCAAGTCTACCACTAGTGCCTGGGCCTGCCCCCTCATCCTCCGTG
GCAGCCTGGATGACACAGAGGCTGATGTGTTGGGGCTTGTGGCTTCAGGGACCCCTGATGTGGCCAGGGC
CATGACTCACACCCTACTCAGGCATCTGGCAGCAAGGCCCCCTACCCAGGCCCAGCACCAGCATCAGGGT
CAGCAAGAACCAACAGAGCATCCCAGCACTTGTGGCCAAGGGACCCTGCTCCAGGTGGCAGCCCACACAG
AGCACGCCCATGTCTCCAGTGTCCCCCATGCCTGCTGCCCCTTCCAGGGGTTCTAA

Translation (461 aa):
MERAEEPVVYQKLLPWEPSLESEEEVEEEETSEALVLNPRRHQDSSRNKAGGLPGTWARVVAALLLLAVG
CSLAVRQLQNQGRSTGSLGSVAPPPGGHSHGPGVYHHGAIISPAGAMFWGLFHDSSSGNSTALTSGPAQT
LAPGLGLPAALPTLHLLHARFGRLPWPRLLVGPTTLAQEGFLVDTPLARALVARGTEGLCPLLCHADGTP
LGAGARATNPQLAAVLRSAALAPTSDLAGDALLSLLAGDLGVEVPSAVPRPTLEPAEQLPVPQGILFTTP
SPSAGPELLALLEAALRSGAPIPDPCPPFLQTAVSPESSALAAVDSSGSVLLLTSSLNCSFGSAHLSPST
GVLLSNLVAKSTTSAWACPLILRGSLDDTEADVLGLVASGTPDVARAMTHTLLRHLAARPPTQAQHQHQG
QQEPTEHPSTCGQGTLLQVAAHTEHAHVSSVPHACCPFQGF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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