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Report for CCDS10589.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10589.1 Public Homo sapiens 16 ACSM3 24 110 108 CCDS HistoryNCBI Gene:6296Re-query CCDS DB by CCDS ID:10589.1Re-query CCDS DB by GeneID:6296See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10589.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000289416.10 ENSP00000289416.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000289416.10Link to Ensembl Protein Viewer:ENSP00000289416.5Re-query CCDS DB by Nucleotide ID:ENST00000289416Re-query CCDS DB by Protein ID:ENSP00000289416
Original member Current member NCBI NM_005622.4 NP_005613.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005622.4Link to Protein Sequence:NP_005613.2Re-query CCDS DB by Nucleotide ID:NM_005622Re-query CCDS DB by Protein ID:NP_005613Link to BLAST:NP_005613.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005613.2 586 Q53FZ2-1 586 100% 0 0

Chromosomal Locations for CCDS 10589.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 20770035 20770253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20775839 20776049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20777373 20777580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20780714 20780857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20780974 20781130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20781708 20781787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20784984 20785107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20786078 20786158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20790587 20790688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20792002 20792129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20792236 20792335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20796370 20796489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20796886 20796972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1761 nt):
ATGCTAGCTCGTGTCACCAGGAAGATGCTACGTCATGCCAAGTGTTTTCAGCGCCTAGCAATTTTTGGTT
CT
GTGAGGGCACTGCATAAAGATAATAGAACAGCAACCCCTCAGAATTTCTCCAACTATGAATCCATGAA
A
CAGGACTTCAAACTGGGGATTCCAGAGTATTTCAACTTTGCTAAAGATGTCCTGGACCAATGGACTGAT
AAG
GAAAAGGCTGGAAAGAAACCTTCAAATCCAGCCTTCTGGTGGATCAACAGAAATGGAGAAGAGATGC
GA
TGGAGTTTTGAGGAACTGGGATCTCTGTCCAGAAAATTTGCCAATATACTTTCAGAAGCCTGTTCCCT
A
CAAAGAGGAGATCGGGTAATTCTGATTCTGCCCAGGGTCCCAGAGTGGTGGCTTGCAAATGTGGCCTGT
CTG
CGAACAGGGACAGTTTTAATTCCAGGAACCACTCAGCTGACCCAGAAAGACATTCTCTACAGACTAC
AA
TCTTCAAAAGCAAACTGCATTATCACCAATGATGTTTTAGCCCCAGCAGTAGACGCTGTTGCATCCAA
A
TGTGAAAATCTGCACTCCAAGCTGATTGTATCAGAGAACTCCAGAGAGGGGTGGGGGAACCTCAAGGAG
TTG
ATGAAACATGCCAGTGACAGCCACACCTGTGTGAAGACAAAACACAATGAGATCATGGCCATATTCT
TT
ACCAGTGGAACAAGTGGATATCCGAAAATGACTGCACACACCCACAGCAGTTTTGGTTTAGGATTATC
T
GTAAATGGAAGGTTCTGGCTAGATTTGACACCCTCAGATGTGATGTGGAATACCTCAGATACGGGCTGG
GCA
AAGTCTGCATGGAGTAGTGTTTTTTCTCCGTGGATCCAGGGAGCATGTGTATTCACACACCATTTAC
CC
CGTTTTGAGCCGACTTCTATCTTGCAAACACTCTCCAAGTACCCCATCACAGTCTTCTGTTCAGCACC
A
ACTGTATACCGAATGCTTGTACAGAATGATATAACCAGCTATAAGTTTAAAAGCTTAAAGCACTGTGTG
AGT
GCTGGGGAACCAATTACCCCTGACGTGACTGAAAAATGGAGAAACAAGACGGGCCTGGATATCTACG
AA
GGATATGGACAGACTGAAACGGTGCTAATCTGTGGAAATTTTAAGGGAATGAAAATTAAACCTGGCTC
A
ATGGGAAAACCTTCTCCTGCTTTCGATGTTAAGATTGTAGATGTAAATGGCAATGTTCTACCTCCTGGA
CAA
GAAGGAGATATTGGCATTCAAGTTCTACCCAACCGACCATTTGGCCTTTTTACTCATTACGTAGATA
AT
CCTTCAAAAACAGCTTCAACTCTACGAGGCAATTTCTATATCACTGGGGACAGAGGATATATGGATAA
A
GATGGGTATTTCTGGTTTGTTGCAAGAGCAGATGATGTCATATTATCCTCTGGCTATCGAATTGGACCA
TTT
GAGGTAGAAAATGCCCTGAATGAACACCCTTCAGTTGCAGAGTCAGCTGTTGTCAGCAGCCCAGACC
CC
ATCAGAGGAGAGGTAGTAAAGGCTTTTGTCGTTCTAAATCCTGATTACAAGTCACATGATCAAGAACA
A
CTAATAAAGGAGATTCAGGAGCATGTTAAAAAAACTACAGCACCTTACAAATATCCCAGAAAGGTAGAA
TTT
ATTCAAGAGCTGCCAAAGACTATCAGTGGGAAGACAAAAAGAAATGAACTGAGGAAGAAAGAATGGA
AG
ACAATTTAA


Translation (586 aa):
MLARVTRKMLRHAKCFQRLAIFGSVRALHKDNRTATPQNFSNYESMKQDFKLGIPEYFNFAKDVLDQWTD
K
EK
AGKKPSNPAFWWINRNGEEMRWSFEELGSLSRKFANILSEACSLQRGDRVILILPRVPEWWLANVAC
L
RT
GTVLIPGTTQLTQKDILYRLQSSKANCIITNDVLAPAVDAVASKCENLHSKLIVSENSREGWGNLKE
L
M
KHASDSHTCVKTKHNEIMAIFFTSGTSGYPKMTAHTHSSFGLGLSVNGRFWLDLTPSDVMWNTSDTGW
A
KSAWSSVFSPWIQGACVFTHHLPRFEPTSILQ
TLSKYPITVFCSAPTVYRMLVQNDITSYKFKSLKHCV
S
AGEPITPDVTEKWRNKTGLDIYEGYGQTET
VLICGNFKGMKIKPGSMGKPSPAFDVKIVDVNGNVLPPG
Q
EGDIGIQVLPNRPFGLFTHYV
DNPSKTASTLRGNFYITGDRGYMDKDGYFWFVARADDVILSSGYRIGP
F
EVENALNEHPSVAESAVVSSPDPIRGE
VVKAFVVLNPDYKSHDQEQLIKEIQEHVKKTTAPYKYPRKVE
F
IQELPKTISGKTKRNELRKKEWKTI




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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