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Report for CCDS10164.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10164.1 Public Homo sapiens 15 ALDH1A2 22 109 92 CCDS HistoryNCBI Gene:8854Re-query CCDS DB by CCDS ID:10164.1Re-query CCDS DB by GeneID:8854See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10164.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000347587.7 ENSP00000309623.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000347587.7Link to Ensembl Protein Viewer:ENSP00000309623.3Re-query CCDS DB by Nucleotide ID:ENST00000347587Re-query CCDS DB by Protein ID:ENSP00000309623
Original member NCBI NM_170696.2 NP_733797.1 Updated not alive Link to Nucleotide Sequence:NM_170696.2Link to Protein Sequence:NP_733797.1Re-query CCDS DB by Nucleotide ID:NM_170696Re-query CCDS DB by Protein ID:NP_733797
Current member NCBI NM_170696.3 NP_733797.1 Accepted alive Link to Nucleotide Sequence:NM_170696.3Link to Protein Sequence:NP_733797.1Re-query CCDS DB by Nucleotide ID:NM_170696Re-query CCDS DB by Protein ID:NP_733797Link to BLAST:NP_733797.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_733797.1 480 O94788-2 480 100% 0 0

Chromosomal Locations for CCDS 10164.1

Assembly GRCh38.p12 (GCF_000001405.38)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 57955197 57955269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 57960770 57960844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 57961137 57961294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 57962012 57962176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 57963885 57964069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 57965725 57965827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 57992945 57993073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 57995078 57995139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58010649 58010778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58013858 58013998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58014177 58014281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58065534 58065650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1443 nt):
ATGACTTCCAGCAAGATAGAGATGCCCGGCGAGGTGAAGGCCGACCCCGCCGCCCTCATGGCGTCGCTGC
AC
CTCCTGCCGTCGCCCACGCCCAATCTCGAAATTAAGTACACCAAGATCTTTATAAACAACGAGTGGCA
G
AACTCAGAGAGTGGGAGAGTGTTCCCTGTCTATAATCCAGCCACAGGAGAACAGGTGTGTGAAGTTCAA
GAA
GCAGACAAGGCAGATATAGACAAAGCAGTGCAGGCAGCCCGCCTGGCTTTCTCTCTTGGTTCAGTGT
GG
AGAAGGATGGATGCTTCAGAAAGGGGACGTCTGTTGGATAAGCTTGCAGACTTGGTGGAACGGGACAG
G
GCAGTTCTTGCAACCATGGAATCCCTAAATGGTGGCAAACCATTCCTGCAAGCTTTTTATGTGGATTTG
CAG
GGCGTCATCAAAACCTTTCGATATTACGCAGGCTGGGCTGATAAAATTCATGGGATGACCATTCCTG
TA
GATGGAGACTATTTTACCTTTACAAGACATGAACCCATTGGAGTGTGTGGACAGATCATCCCATGGAA
C
TTCCCCCTGCTGATGTTTGCCTGGAAAATAGCTCCAGCTTTGTGCTGTGGCAATACAGTAGTTATTAAG
CCA
GCAGAGCAAACACCACTCAGTGCACTCTACATGGGAGCCCTCATCAAGGAGGTTGGAAAGCTTATCC
AA
GAAGCAGCTGGAAGAAGTAATTTGAAGAGAGTAACTCTGGAACTTGGAGGCAAAAGTCCTAATATTAT
T
TTTGCTGATGCTGACTTGGACTATGCTGTGGAGCAGGCCCACCAGGGTGTGTTCTTCAATCAAGGTCAG
TGC
TGCACTGCAGGCTCTCGCATCTTCGTGGAGGAGTCCATCTATGAGGAGTTTGTGAGAAGAAGCGTGG
AG
CGGGCCAAGAGGCGCGTAGTGGGGAGTCCCTTTGACCCCACCACTGAGCAGGGTCCCCAGATTGATAA
G
AAACAGTACAACAAGATCTTGGAACTCATCCAGAGTGGTGTGGCTGAGGGCGCCAAGCTGGAATGTGGA
GGC
AAAGGACTGGGCCGAAAGGGGTTTTTCATTGAGCCCACAGTGTTTTCCAACGTCACTGATGATATGC
GG
ATTGCCAAGGAGGAGATCTTTGGCCCTGTTCAGGAAATTTTGAGATTTAAGACGATGGATGAAGTTAT
C
GAAAGAGCCAATAACTCAGACTTTGGACTCGTAGCAGCTGTCTTTACTAATGACATCAACAAGGCCCTC
ACA
GTGTCTTCTGCAATGCAAGCTGGGACTGTTTGGATCAATTGTTACAATGCCTTAAATGCCCAGAGCC
CC
TTTGGGGGATTCAAGATGTCTGGAAATGGGAGAGAAATGGGAGAATTTGGCTTGCGGGAGTACTCAGA
A
GTTAAGACGGTGACAGTAAAGATCCCCCAGAAGAACTCCTAA


Translation (480 aa):
MTSSKIEMPGEVKADPAALMASLHLLPSPTPNLEIKYTKIFINNEWQNSESGRVFPVYNPATGEQVCEVQ
E
ADK
ADIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRAVLATMESLNGGKPFLQAFYVDL
Q
GVIKTFRYYAGWADKIHGMTIPV
DGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIK
P
AEQTPLSALYMGALIKE
VGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQ
C
CTAGSRIFVEESIYEEFVRRSVERAKRRVVGSPFDPTTEQGPQ
IDKKQYNKILELIQSGVAEGAKLECG
G
KGLGRKGFFIEPTVFSNVTDDMRIAKEE
IFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKAL
T
VSSAMQAGTV
WINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVKIPQKNS



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser