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Report for CCDS73058.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73058.1 Public Homo sapiens 1 GCSAML 24 110 108 CCDS HistoryNCBI Gene:148823Re-query CCDS DB by CCDS ID:73058.1Re-query CCDS DB by GeneID:148823See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73058.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000527084.5 ENSP00000432118.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000527084.5Link to Ensembl Protein Viewer:ENSP00000432118.1Re-query CCDS DB by Nucleotide ID:ENST00000527084Re-query CCDS DB by Protein ID:ENSP00000432118
Original member Current member EBI ENST00000463359.5 ENSP00000434526.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000463359.5Link to Ensembl Protein Viewer:ENSP00000434526.1Re-query CCDS DB by Nucleotide ID:ENST00000463359Re-query CCDS DB by Protein ID:ENSP00000434526
Original member Current member EBI ENST00000527541.5 ENSP00000435110.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000527541.5Link to Ensembl Protein Viewer:ENSP00000435110.1Re-query CCDS DB by Nucleotide ID:ENST00000527541Re-query CCDS DB by Protein ID:ENSP00000435110
Original member Current member EBI ENST00000623578.3 ENSP00000485175.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000623578.3Link to Ensembl Protein Viewer:ENSP00000485175.1Re-query CCDS DB by Nucleotide ID:ENST00000623578Re-query CCDS DB by Protein ID:ENSP00000485175
Original member Current member NCBI NM_001281836.2 NP_001268765.1 Accepted alive Link to Nucleotide Sequence:NM_001281836.2Link to Protein Sequence:NP_001268765.1Re-query CCDS DB by Nucleotide ID:NM_001281836Re-query CCDS DB by Protein ID:NP_001268765Link to BLAST:NP_001268765.1
Original member Current member NCBI NM_001281837.1 NP_001268766.1 Accepted alive Link to Nucleotide Sequence:NM_001281837.1Link to Protein Sequence:NP_001268766.1Re-query CCDS DB by Nucleotide ID:NM_001281837Re-query CCDS DB by Protein ID:NP_001268766Link to BLAST:NP_001268766.1
Original member Current member NCBI NM_001281838.2 NP_001268767.1 Accepted alive Link to Nucleotide Sequence:NM_001281838.2Link to Protein Sequence:NP_001268767.1Re-query CCDS DB by Nucleotide ID:NM_001281838Re-query CCDS DB by Protein ID:NP_001268767Link to BLAST:NP_001268767.1

Chromosomal Locations for CCDS 73058.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 247563597 247563639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247565931 247565959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247574143 247574382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (312 nt):
ATGACTACATTTGAAAGAAAACTTCAAGATCAAGATAAGAAAAGCCAAGAAGTTTCATCCACTTCTAATC
AGGAAAACGAGAATGGCAGTGGTTCTGAAGAAGTGTGCTACACTGTCATTAATCACATCCCCCATCAGAG
ATCCTCCCTGAGCTCCAATGATGATGGCTATGAGAACATTGACTCCCTCACAAGGAAAGTGAGACAGTTT
AGAGAAAGGTCAGAGACAGAATATGCCCTTCTTAGGACTTCTGTTAGTAGGCCTTGTTCCTGCACCCATG
AGCATGATTATGAAGTTGTGTTTCCACACTAA

Translation (103 aa):
MTTFERKLQDQDKKSQEVSSTSNQENENGSGSEEVCYTVINHIPHQRSSLSSNDDGYENIDSLTRKVRQF
RERSETEYALLRTSVSRPCSCTHEHDYEVVFPH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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