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Report for CCDS29498.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29498.1 Public Mus musculus 19 Gpha2 23 108 98 CCDS HistoryNCBI Gene:170458Re-query CCDS DB by CCDS ID:29498.1Re-query CCDS DB by GeneID:170458See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29498.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025698.13 ENSMUSP00000025698.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025698.13Link to Ensembl Protein Viewer:ENSMUSP00000025698.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000025698Re-query CCDS DB by Protein ID:ENSMUSP00000025698
Original member Current member EBI ENSMUST00000113526.1 ENSMUSP00000109154.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113526.1Link to Ensembl Protein Viewer:ENSMUSP00000109154.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113526Re-query CCDS DB by Protein ID:ENSMUSP00000109154
Original member Current member NCBI NM_130453.3 NP_569720.1 Accepted alive Link to Nucleotide Sequence:NM_130453.3Link to Protein Sequence:NP_569720.1Re-query CCDS DB by Nucleotide ID:NM_130453Re-query CCDS DB by Protein ID:NP_569720Link to BLAST:NP_569720.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_569720.1 128 Q925Q5 128 100% 0 0

Chromosomal Locations for CCDS 29498.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 6226788 6226887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6226971 6227155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6227501 6227602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (387 nt):
ATGCCCATGGCACCACGAGTCTTGCTCCTTTGCCTGCTGGGCCTGGCAGTCACTGAAGGGCATAGCCCAG
AGACAGCCATCCCAGGCTGCCACTTGCACCCCTTCAATGTGACGGTGCGCAGTGATCGCCTCGGCACTTG
CCAGGGCTCCCACGTGGCACAGGCCTGTGTAGGACACTGTGAGTCTAGTGCTTTCCCTTCCCGGTACTCT
GTGCTGGTGGCCAGTGGCTATCGGCACAACATCACCTCTTCCTCCCAGTGCTGCACCATCAGCAGCCTCA
GAAAGGTGAGGGTGTGGCTGCAGTGCGTGGGGAACCAGCGTGGGGAGCTTGAGATCTTTACTGCAAGGGC
CTGCCAGTGTGATATGTGCCGTTTCTCCCGCTACTAG

Translation (128 aa):
MPMAPRVLLLCLLGLAVTEGHSPETAIPGCHLHPFNVTVRSDRLGTCQGSHVAQACVGHCESSAFPSRYS
VLVASGYRHNITSSSQCCTISSLRKVRVWLQCVGNQRGELEIFTARACQCDMCRFSRY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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