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Report for CCDS27240.1 (previous version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27240.1 Public Mus musculus 14 Entpd4 2 36.1 39 CCDS HistoryNCBI Gene:67464Re-query CCDS DB by CCDS ID:27240.1Re-query CCDS DB by GeneID:67464

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Sequence IDs included in CCDS 27240.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member EBI ENSMUST00000064831 ENSMUSP00000065046 Accepted not alive Link to Ensembl Transcript Viewer:ENSMUST00000064831Link to Ensembl Protein Viewer:ENSMUSP00000065046Re-query CCDS DB by Nucleotide ID:ENSMUST00000064831Re-query CCDS DB by Protein ID:ENSMUSP00000065046
Original member NCBI NM_026174.1 NP_080450.1 Updated not alive Link to Nucleotide Sequence:NM_026174.1Link to Protein Sequence:NP_080450.1Re-query CCDS DB by Nucleotide ID:NM_026174Re-query CCDS DB by Protein ID:NP_080450
NCBI NM_026174.2 NP_080450.1 Accepted not alive Link to Nucleotide Sequence:NM_026174.2Link to Protein Sequence:NP_080450.1Re-query CCDS DB by Nucleotide ID:NM_026174Re-query CCDS DB by Protein ID:NP_080450Link to BLAST:NP_080450.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080450.1 613 Q9DBT4-1 613 100% 0 0

Chromosomal Locations for CCDS 27240.1

Assembly MGSCv36 (GCF_000001635.15)

On '+' strand of Chromosome 14 (NC_000080.4)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

Chromosome Start Stop Links
14 68300917 68300924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68302403 68302600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68304033 68304238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68307732 68307882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68308724 68308827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68310043 68310102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68310325 68310479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68312152 68312318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68314969 68315293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68316898 68316983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68317653 68317814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 68318850 68319069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1842 nt):
ATGGGGAGGATTGGCATTTCCTGTCTCTTTCCTGCCTCTTGGCATTTTAGCATCTCTCCAGTGGGCTGTC
CTCGAATTCTGAACACCAATTTACGACAAATCGTTGTCATTAGCATCCTGGCTGCAGCTGTCTCCCTTTT
ATACTTCTCTGTTGTCATAATCCGCAGCAAGTATGGGTGGCTGTCAAAGGACAAGAAATTTCAAAGGTAC
TTGGCCCGAGTCACAGACGTTGAGGCCACAGACACCAACAACCCCAGCGTGAACTATGGCATCGTGGTGG
ACTGCGGCAGCAGTGGGTCTCGGATATTTGTCTACTGCTGGCCTCGGCACAATGGCAACCCTCACGATCT
GCTGGACATCAGACAGATGAGGGACAAAAACCGGAAGCCAGTGGTGATGAAGATTAAGCCCGGCATCTCA
GAGTTTGCTACCTCTCCAGAAAAAGTCAGCGACTACATTTCTCCGCTTCTGAGCTTTGCTGCAGAACATG
TGCCTCGGGCAAAACACAAAGAGACACCTCTCTACATTCTCTGCACAGCTGGAATGAGAGTCCTTCCTGA
AAGCCAGCAGAAAGCCATCCTAGAGGACCTCCTGACCGACATCCCTGTGCACTATGATTTCCTGTTTTCT
GACTCCCATGCCGAAGTCATCTCAGGAAAACAAGAAGGTGTGTATGCTTGGATCGGCATTAATTTTGTCC
TCGGACGGTTTGAGCATATTGAGGAGGATGACGAGGCGGTTGTGGAAGTCAACATTCCGGGCAGCGAGAG
CAGCGAGGCCATCGTGCGGAAAAGGACAGCTGGTGTCCTCGACATGGGAGGCGTGTCTACCCAGATAGCG
TACGAAGTCCCCCAAACTGTAAGCTTTGCCTCCTCGCAGCAGGAAGAAGTAGCTAAAAACCTGTTAGCTG
AATTCAACCTGGGGTGCGATGTCCACCAGACTGAGCATGTGTACCGCGTCTACGTGGCCACGTTTCTTGG
GTTTGGTGGTAATGCTGCCCGGCAGAGATATGAAGACCGACTATTTGCCAGCACAGTTCAGAAAAACAGG
CTCCTGGGTAAACAGACTGGTCTGACTCCTGATGCTCCACTACTGGATCCCTGCTTGCCTCTGGACATTA
AAGATGAGATCCAGCAAAACGGGCAGACCCTGTACCTTCAGGGGACAGGAGACTTTGACCTGTGTCGAGA
GACCCTGCAGCCTTTCATGAACAAAACCAATGAGACCCAGACTTCCCTCAATGGCGTCTACCAGCCTCCA
ATCCACTTCCAGAACAGTGAATTCTACGGCTTCTCTGAGTTCTACTACTGCACCGAGGATGTCTTGCGAA
TGGGGGGAGACTACAATGCTGCTAGATTCACTCAAGCTGCCAAGGATTACTGTGCAACAAAGTGGTCGAT
CCTGCGGGAACGCTTTGACCGAGGACTCTATGCCTCTCATGCCGACCTCCATCGACTGAAGTATCAGTGT
TTCAAATCAGCCTGGATGTTCGAGGTGTTCCACAAAGGCTTCTCCTTTCCTGTCACCTACAAAAACCTGA
AGACGGCCTTGCAGGTGTATGACAAGGAAGTACAGTGGACCCTGGGGGCCATCCTTTACCGGACCCGCTT
CCTGCCCTTGAGAGACATCCGGCAGGAGGTGTTCCGAGCTGGCCACGCGCACTGGCGGGGCGTGTCCTTC
GTCTACAACCACTATCTGTTCTCCGGTTGCTTCCTGGTCGTCCTTCTGTCCATCCTTCTCTACCTGCTGC
GGCTGCGGCGCATCCACCGCAGGGCGCCCCGCACTGGCTCTCTGTGGATGGAGGAAGGCCTGCCCTCCCA
GAAGGGCCCTGGGCCCTTGTGA

Translation (613 aa):
MGRIGISCLFPASWHFSISPVGCPRILNTNLRQIVVISILAAAVSLLYFSVVIIRSKYGWLSKDKKFQRY
LARVTDVEATDTNNPSVNYGIVVDCGSSGSRIFVYCWPRHNGNPHDLLDIRQMRDKNRKPVVMKIKPGIS
EFATSPEKVSDYISPLLSFAAEHVPRAKHKETPLYILCTAGMRVLPESQQKAILEDLLTDIPVHYDFLFS
DSHAEVISGKQEGVYAWIGINFVLGRFEHIEEDDEAVVEVNIPGSESSEAIVRKRTAGVLDMGGVSTQIA
YEVPQTVSFASSQQEEVAKNLLAEFNLGCDVHQTEHVYRVYVATFLGFGGNAARQRYEDRLFASTVQKNR
LLGKQTGLTPDAPLLDPCLPLDIKDEIQQNGQTLYLQGTGDFDLCRETLQPFMNKTNETQTSLNGVYQPP
IHFQNSEFYGFSEFYYCTEDVLRMGGDYNAARFTQAAKDYCATKWSILRERFDRGLYASHADLHRLKYQC
FKSAWMFEVFHKGFSFPVTYKNLKTALQVYDKEVQWTLGAILYRTRFLPLRDIRQEVFRAGHAHWRGVSF
VYNHYLFSGCFLVVLLSILLYLLRLRRIHRRAPRTGSLWMEEGLPSQKGPGPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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