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  Research Group of Ivan Ovcharenko Comparative Genomics Resources at NCBI Comparative Genomics Center
ECR Browser Interactive browser of genome conservation and evolution
SynoR Genome scanner for gene regulatory elements with synonymous function
Mulan Multiple sequence alignment tool (TBA-based)
zPicture Pairwise sequence alignment tool (blastz-based)
eShadow Phylogenetic shadowing
MultiTF Identification of transcription factor binding sites (TFBS) conserved in multiple alignments
rVista 2.0 Identification of TFBS conserved in pairwise alignments
DiRE Identification of DIstant Regulatory Elements of co-regulated genes
Array2BIO Integrative platform for the analysis of microarray data
ECRbase Database of evolutionary conserved regions (ECRs), promoters, and TFBS in vertebrate genomes

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