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ECR Browser Interactive browser of genome conservation and evolution
SynoR Genome scanner for gene regulatory elements with synonymous function
Mulan Multiple sequence alignment tool (TBA-based)
zPicture Pairwise sequence alignment tool (blastz-based)
MultiTF Identification of transcription factor binding sites (TFBS) conserved in multiple alignments
rVista 2.0 Identification of TFBS conserved in pairwise alignments
DiRE Identification of DIstant Regulatory Elements of co-regulated genes
CLARE Cracking the language of regulatory elements
CAPE Predicting causal noncoding variants
SNPDelScore Combining multiple methods developed by the community to predict causal noncoding variants

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