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Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments; 678.OA.mesocosm.388

Identifiers
BioSample: SAMEA4460867; SRA: ERS1360046
Organism
marine sediment metagenome
unclassified entries; unclassified sequences; metagenomes; ecological metagenomes
Attributes
alkalinity2632.7
ammoniumMissing: Not Provided
carbon/nitrogen ratioMissing: Not Provided
depth5
dissolved carbon dioxide2605.5
elevation0
broad-scale environmental contextmarine biome
local-scale environmental contextneritic zone
environmental packagesediment
environmental mediummarine sediment
geographic locationUnited Kingdom: England,Plymouth harbor
host subject id388
nitrate11.08
nitriteMissing: Not Provided
organic carbonMissing: Not Provided
organic nitrogenMissing: Not Provided
pH7.69
pH methodMissing: Not Provided
phosphate1.8
salinity35.1
sample nameqiita_sid_678:678.OA.mesocosm.388
sample typemarine sediment
silicate14.8
temperature11
total carbonMissing: Not Provided
total nitrogenMissing: Not Provided
ENA first public2016-10-04
ENA last update2016-09-20
ENA-CHECKLISTERC000011
External IdSAMEA4460867
INSDC center aliasUCSDMI
INSDC center nameUniversity of California San Diego Microbiome Initiative
INSDC first public2016-10-04T17:01:55Z
INSDC last update2016-09-20T23:28:18Z
INSDC statuspublic
Submitter Idqiita_sid_678:678.OA.mesocosm.388
anonymized name388
collection_timestamp05/03/2010
common namemarine sediment metagenome
core12
dna_extractedTRUE
emp statusEMP
extracted DNA avail nowTRUE
latitude50.338
longitude-4.148
pco21465.8
physical_specimen_locationANL
physical_specimen_remainingTRUE
publicTRUE
required_sample_info_statuscompleted
row2
sample_progresssequenced (16S)
sed_typeBurrow
shrimpUpogebia
tank2.2
Description

Sediment DNA extracted from OA mesocosm study number 388

BioProject
PRJEB15461
Retrieve all samples from this project

Submission
EBI; 2016-10-05
Accession:
SAMEA4460867
ID:
5862662

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