Bacteria (ID 547984) - BioProject

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Accession: PRJNA547984 ID: 547984

Bacteria

Microplastic colonizing bacteria

31 complete genomes of various bacterial species isolated from the surface of a polyethylene microplastic particle, detritus agregates, and non-filtered water from the water column of the Tank 6 of a marine aquarium containing stony-coral fragments at 26°C.

Accession	PRJNA547984
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Franco A et al., "High diversity of Vibrio spp. associated with different ecological niches in a marine aquaria system and description of Vibrio aquimaris sp. nov.", Syst Appl Microbiol, 2020 Sep;43(5):126123
Submission	Registration date: 9-Jun-2019 Uni Bielefeld
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	112
SRA Experiments	62
Protein Sequences	142872
Publications
PubMed	1
Other datasets
BioSample	31
Assembly	31

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Total

31
31

Assembly	Chrs	BioSample	Strain	Taxonomy
GCA_009363695.1	1	SAMN11996113	THAF10	Bacillus sp. THAF10
GCA_009363635.1	1	SAMN11996116	THAF29	Erythrobacter sp. THAF29
GCA_009363675.1	4	SAMN11996114	THAF12	Halomonas sp. THAF12
GCA_009363755.1	1	SAMN11996109	THAF5a	Halomonas sp. THAF5a
GCA_009363375.1	5	SAMN11996129	THAF187b	Labrenzia sp. THAF187b
GCA_009363335.1	5	SAMN11996131	THAF191a	Labrenzia sp. THAF191a
GCA_009363315.1	5	SAMN11996132	THAF191b	Labrenzia sp. THAF191b
GCA_009363595.1	4	SAMN11996119	THAF35	Labrenzia sp. THAF35
GCA_009363435.1	1	SAMN11996126	THAF82	Labrenzia sp. THAF82
GCA_009363275.1	1	SAMN11996134	THAF197a	Marinobacter sp. THAF197a
GCA_009363515.1	2	SAMN11996122	THAF39	Marinobacter sp. THAF39
GCA_009363535.1	3	SAMN11996121	THAF38	Microbulbifer sp. THAF38
GCA_009363295.1	3	SAMN11996133	THAF192	Mycobacterium sp. THAF192
GCA_009363795.1	2	SAMN11996107	THAF1	Palleronia sp. THAF1
GCA_009363775.1	2	SAMN11996108	THAF3	Pseudoalteromonas sp. THAF3
GCA_009363395.1	1	SAMN11996128	THAF187a	Pseudomonas sp. THAF187a
GCA_009363475.1	1	SAMN11996124	THAF42	Pseudomonas sp. THAF42
GCA_009363255.1	6	SAMN11996135	THAF197b	Roseivivax sp. THAF197b
GCA_009363575.1	3	SAMN11996117	THAF30	Roseivivax sp. THAF30
GCA_009363495.1	7	SAMN11996123	THAF40	Roseivivax sp. THAF40
GCA_009363655.1	6	SAMN11996115	THAF27	Roseovarius sp. THAF27
GCA_009363735.1	6	SAMN11996111	THAF8	Roseovarius sp. THAF8
GCA_009363715.1	6	SAMN11996112	THAF9	Roseovarius sp. THAF9
GCA_009363615.1	5	SAMN11996118	THAF33	Ruegeria sp. THAF33
GCA_009363815.1	1	SAMN11996110	THAF7b	Stutzerimonas frequens
GCA_009363555.1	8	SAMN11996120	THAF37	Sulfitobacter sp. THAF37
GCA_009363415.1	4	SAMN11996127	THAF100	Vibrio aquimaris
GCA_009363355.1	6	SAMN11996130	THAF190c	Vibrio sp. THAF190c
GCA_009708195.1	4	SAMN13091047	THAF191c	Vibrio sp. THAF191c
GCA_009676865.1	4	SAMN13091048	THAF191d	Vibrio sp. THAF191d
GCA_009363455.1	4	SAMN11996125	THAF64	Vibrio sp. THAF64

SRA Data Details

Parameter	Value
Data volume, Gbases	18
Data volume, Mbytes	13868

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Microplastic colonizing bacteria

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