Crystallization and preliminary X-ray analysis of dmpFG-encoded 4-hydroxy-2-ketovalerate aldolase--aldehyde dehydrogenase (acylating) from Pseudomonas sp. strain CF600

Acta Crystallogr D Biol Crystallogr. 2001 Apr;57(Pt 4):582-5. doi: 10.1107/s0907444901000439.

Abstract

The final two steps of the meta-cleavage pathway for catechol degradation in Pseudomonas sp. strain CF600 involve the conversion of 4-hydroxy-2-ketovalerate to pyruvate and acetyl coenzyme A by the enzymes 4-hydroxy-2-ketovalerate aldolase and NAD(+)-dependent acylating aldehyde dehydrogenase. Biochemical studies indicate that these two enzymes comprise a bifunctional heterodimer (DmpFG, molecular mass 71 kDa) and suggest that the product of the aldolase reaction is transferred to the dehydrogenase active site via a channeling mechanism. Crystals of the DmpFG complex grow in multiple fan-like clusters of thin plates by the hanging-drop method and are improved by streak-seeding. The crystals belong to the orthorhombic space group P2(1)2(1)2(1), with unit-cell parameters a = 102.0, b = 140.7, c = 191.3 A, and diffract to 2.1 A resolution. The asymmetric unit contains four DmpFG heterodimers. Heavy-atom derivative screening identified three isomorphous derivatives.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aldehyde Oxidoreductases / chemistry*
  • Aldehyde Oxidoreductases / metabolism
  • Binding Sites
  • Crystallization
  • Dimerization
  • Multienzyme Complexes / chemistry*
  • Multienzyme Complexes / metabolism
  • NAD / metabolism
  • Oxo-Acid-Lyases / chemistry*
  • Oxo-Acid-Lyases / metabolism
  • Pseudomonas / enzymology*
  • Sequence Homology, Amino Acid
  • Software
  • X-Ray Diffraction / methods

Substances

  • Multienzyme Complexes
  • NAD
  • Aldehyde Oxidoreductases
  • acetaldehyde dehydrogenase (acylating)
  • 4-hydroxy-2-ketovalerate aldolase
  • Oxo-Acid-Lyases