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4.26 OTHER_ADVANCED

Option OTHER_ADVANCED

Function Allows string inputs analogous to command line parameters
Input format string
Default -
Example To set Expect value cutoff to 10000, use '&EXPECT=-e+1e4&'

Note: Setting parameter in OTHER_ADVANCED will override the other URL setting of that parameter. Supported options are:

-G: gap open cost

-E: gap extend cost

-q: penalty for nucleotide mismatch

-r: reward for nucleotide match

-e: expect value

-W: wordsize

-v: Number of descriptions to print

-b: Number of alignments to show

-K: Number of best hits from a region to keep

-Y: effective search space


next up previous contents index
Next: 4.27 ALIGNMENT_VIEW Up: 4 Description of tags Previous: 4.25 OOF_ALIGN   Contents   Index
Tao Tao 2006-12-04