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4.25 OOF_ALIGN

Option OOF_ALIGN

Function Non-zero positive integer setting will turn on OOF alignment for blastx and set frame shift penalty to that value .
Input format positve integer
Default 0 (off)
Example To set this penalty to 20, use '&OOF_ALIGN=20&'

Note: Relevant only to blastx.



Tao Tao 2006-12-04