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5.1.53 SEARCHSP_EFF

Parameter: SEARCHSP_EFF

Description Specifies the effective search space size to use in Expect value calculation
Value real
Default 0
CMD Put
Example '...&SEARCHSP_EFF=1e8&...' set this parameter to 10 $ ^{\textrm{8}}$

Note: Effective search space is the product of the effective query length and the effective database length. Use '-Y' for standalone commandline BLAST, or '-Y value' under OTHER_ADVANCED parameter for wwwblast.



Tao Tao 2007-08-03