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5.1.3 BLAST_PROGRAM

Parameter: BLAST_PROGRAM

Description BLAST program to use for the search
Value blastn, MegaBlast, discoMegablast; blastp, psiBlast, phiBlast; blastx, tblastn, tblastx
Default optional
CMD Put
Example '...&BLAST_PROGRAM=blastx&...' sets this to blastx.
..

Note: This parameter is optional. If specified, use blastn, MegaBlast, and discoMegablast with 'PROGRAM=blastn'; blastp, psiBlast, and phiBlast with 'PROGRAM=blastp'; blastx with 'PROGRAM=blastx'; tblastn with 'PROGRAM=tblastn'; and tblastx with 'PROGRAM=tblastx'.



Tao Tao 2007-08-03