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Bibliography

1
S F Altschul, W Gish, W Miller, E W Myers, and D J Lipman.
Basic local alignment search tool.
J Mol Biol, 215(3):403-410, Oct 1990.

2
S F Altschul, T L Madden, A A Schäffer, J Zhang, Z Zhang, W Miller, and D J Lipman.
Gapped blast and psi-blast: a new generation of protein database search programs.
Nucleic Acids Res, 25(17):3389-3402, Sep 1997.

3
A Lupas, M Van Dyke, and J Stock.
Predicting coiled coils from protein sequences.
Science, 252(5010):1162-1164, May 1991.

4
B Ma, J Tromp, and M Li.
Patternhunter: faster and more sensitive homology search.
Bioinformatics, 18(3):440-445, Mar 2002.

5
A A Schäffer, L Aravind, T L Madden, S Shavirin, J L Spouge, Y I Wolf, E V Koonin, and S F Altschul.
Improving the accuracy of psi-blast protein database searches with composition-based statistics and other refinements.
Nucleic Acids Res, 29(14):2994-3005, Jul 2001.

6
J A Wilson, J E Hill, J Kuzio, and P Faulkner.
Characterization of the baculovirus choristoneura fumiferana multicapsid nuclear polyhedrosis virus p10 gene indicates that the polypeptide contains a coiled-coil domain.
J Gen Virol, 76 ( Pt 12):2923-2932, Dec 1995.

7
Altschul SF Yu YK.
The construction of amino acid substitution matrices for the comparison of proteins with non-standard compositions.
Bioinformatics, 21(7):902-911, Apr 2005.

8
Z Zhang, S Schwartz, L Wagner, and W Miller.
A greedy algorithm for aligning dna sequences.
J Comput Biol, 7(1-2):203-214, Feb-Apr 2000.



Tao Tao 2007-08-03