3.2.43 Parameter -C

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3.2.43 Parameter -C

Parameter -C

Function Uses composition-based statistics for tblastn

Default D

Input format [String]

Example To turn on unconditional composition-based statistics, use: -C 3

Parameter	-C
Function	Uses composition-based statistics for tblastn
Default	D
Input format	[String]
Example	To turn on unconditional composition-based statistics, use: -C 3

Note:

Available values are D (d, 0, F, f) for no composition-based statistics, 1 (T, t) for composition-based statistics ([4]), 2 for conditional composition-based score ([5]), 3 for unconditional composition-based score adjustment unconditionally ([5]).

Tao Tao 2006-12-29