3.2.23 Parameter -W

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3.2.23 Parameter -W

Parameter -W

Function Specifies the word size

Default 0

Input format Integer

Example To set word size to 27, use: -W 27

Parameter	-W
Function	Specifies the word size
Default	0
Input format	Integer
Example	To set word size to 27, use: -W 27

Note:

Zero invokes default, 11 for blastn, 28 for megablast, 3 for all others. Only 2 and 3 are available for protein alignment. Word size range for blastn is 7 and up, for megablast 12 and up.

Tao Tao 2006-12-29