| Parameter | -m |
|---|---|
| Function | Specifies alignment view |
| Default | 0 |
| Input format | integer |
| Example | To get blast result in XML format, use: -m 7 |
Note:
Input value for -m and the alignment view they specify are listed below with more details in Section 6.
0 : traditional pairwise,
1 : query-anchored showing identities,
2 : query-anchored no identities,
3 : flat query-anchored, show identities,
4 : flat query-anchored, no identities,
5 : query-anchored no identities and blunt ends,
6 : flat query-anchored, no identities and blunt ends,
7 : XML,
8 : tabular without post search sorting,
9 : tabular with comment lines and post search sorting,
10 : ascii ASN, and
11 : binary ASN.