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2.2.3 Setup

To set up, we need to create a file named .ncbirc to store the configuration information. For example, if we keep the blast-2.2.15 directory under the home directory, and that directory does have a db subdirectory, we can specify the path to both data and db directory the following way:

[NCBI]

DATA=~/blast-2.2.15/data

[BLAST]

BLASTDB=~/blast-2.2.15/db

This .ncbirc file should be kept in the home directory. We recommend the use of absolute path if the blast directory is placed somewhere else other than the home directory.



Tao Tao 2006-12-29