Welcome to MassSieve distribution website!
MassSieve is a free tool for parsing MS/MS search engine results. It allows you to combine the results of several searches into a single experiment and parsimoniously separate the results. Many different experiments can be loaded and the results can be compared and contrasted.
A copy of our ASMS 2008 poster can be downloaded from here.
A copy of our ASMS 2007 poster can be downloaded from here.
Features
- Written in Java, tested on Win32, OS X, and Linux.
- Search Engines:
- Mascot(DAT files)
- OMSSA(XML only)
- X!Tandem
- Any PepXML compatible
- Filter by:
- Cutoff score (per search engine)
- Number and type of search engine
- Number of scan per peptide
- Number of peptides per protein
- Percent protein coverage
- View by:
- Peptide hits
- Peptides
- Proteins
- Clusters (all related peptides and proteins)
- Parsimony
Download
Auxillary Java Libraries:
- ANTLR Parser Generator
- BioJava
- Glazed Lists
- JH Labs Layout
- Mascot Datfile library
- Prefuse visualization toolkit
- Sanaware Java Docking