SRA

ERX111366: Whole Genome Sequencing of house mouse
1 ILLUMINA (Illumina HiSeq 2000) run: 19.7M spots, 3.9G bases, 2.3Gb downloads

Design: Illumina sequencing of library 4505628, constructed from sample accession ERS094019 for study accession ERP001221. This is part of an Illumina multiplexed sequencing run (7748_3). This submission includes reads tagged with the sequence GTGTCCTT.

Submitted by: The Wellcome Trust Sanger Institute (SC)

Study: Induction_of_mutation_rate_in_mouse_pedigrees_by_ionising_radiation

PRJEB2883 • ERP001221 • All experiments • All runs

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Deep (>25X) whole genome sequencing of 20 mice from pedigrees in which a male mouse has been exposed to 3Gy of ionising radiation (acute X-rays) 4 days or 8 weeks before conceiving pups. The two timepoints are to assess the impact of IR on pre-meiotic (i.e. spermatognoial stem cells) and post-meiotic (i.e. sperm) gametes. At each timepoint, each irradiated male (C57BL/6J) was mated with two females (CBA/Ca). The 20 mice will be selected for sequencing on the basis of maximising the number of independent meioses studied at the two timepoints

Sample:

SAMEA1325012 • ERS094019 • All experiments • All runs

Organism: Mus musculus

Library:

Name: 4505628

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Standard

Runs: 1 run, 19.7M spots, 3.9G bases, 2.3Gb

Run	# of Spots	# of Bases	Size	Published
ERR135348	19,725,780	3.9G	2.3Gb	2012-08-04

ID:: 221168

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