RNA-seq for oscmt3a mutant plant2 - SRA

SRX732290: RNA-seq for oscmt3a mutant plant2
1 ILLUMINA (Illumina HiSeq 2000) run: 50.3M spots, 10.1G bases, 5.9Gb downloads

Design: Loss of function mutations in the rice chromomethylase OsCMT3a cause a burst of transposition. Cheng C, Tarutani Y, Miyao A, Ito T, Yamazaki M, Sakai H, Fukai E, Hirochika H. Plant J. 2015 Sep;83(6):1069-81. doi: 10.1111/tpj.12952.

Submitted by: National Insitute of Japan

Study: Oryza sativa cultivar:Nipponbare Transcriptome or Gene expression

PRJNA263691 • SRP048885 • All experiments • All runs

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RNA-seq to study the role of a rice chromomethylase gene OsCMT3a on the transcriptional regulation of cellular gene and transposable elements.

Sample:

SAMN03106924 • SRS721237 • All experiments • All runs

Organism: Oryza sativa Japonica Group

Library:

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: TRANSCRIPTOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward101 reverse

Runs: 1 run, 50.3M spots, 10.1G bases, 5.9Gb

Run	# of Spots	# of Bases	Size	Published
SRR1611769	50,339,698	10.1G	5.9Gb	2015-09-11

ID:: 1058491

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