U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX595649: Comparison of NextSeq500, HiSeq, GAIIx and MiSeq Platforms with PhiX Phage Genome sequencing: HiSeq 2000 PhiX control library data
1 ILLUMINA (Illumina HiSeq 2000) run: 10M spots, 2G bases, 1.1Gb downloads

Submitted by: Genotypic Technology Pvt Ltd
Study: Comparison of NextSeq500, HiSeq, GAIIx and MiSeq Platforms with PhiX Phage Genome sequencing
show Abstracthide Abstract
Comparison of NextSeq 500, HiSeq, GAIIx and MiSeq Platforms: resequencing of PhiX Phage genome. At Genotypic Technology's NGS lab, we compared the data from NextSeq, HiSeq, GAIIx and MiSeq Illumina platforms using the data output from the control libraries. HiSeq (100 base pair paired end reads), NextSeq 500 (150 base pair paired end reads), GAIIx (36 base pair reads) and MiSeq (300 base pair Paired end reads) resulted in comparable alignment to the reference genome and better assembly with increase in lengths, the detailed analysis will be published else where. The data provided is 134.17M reads of 150 base paired end reads from NextSeq 500 sequencer. This data can be used for QC of Nextseq data as well as comparison of data from GAIIx, HiSeq and MiSeq platforms which use the same PhiX phage genome as a control.
Sample:
SAMN02837524 • SRS628438 • All experiments • All runs
Library:
Name: PhiX
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: unspecified
Layout: PAIRED
Spot descriptor:
forward102  reverse

Runs: 1 run, 10M spots, 2G bases, 1.1Gb
Run# of Spots# of BasesSizePublished
SRR139064510,000,0002G1.1Gb2015-07-22

ID:
842386

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...