Genome Sequencing and Assembly of Microtus ochrogaster (Prairie Vole). - SRA

SRX101121: Genome Sequencing and Assembly of Microtus ochrogaster (Prairie Vole).
1 ILLUMINA (Illumina HiSeq 2000) run: 28.7M spots, 6G bases, 3.7Gb downloads

UUID: 43e5f3f7-7902-4a06-ac83-6d2b6086b5cd

Design: 6-14kb genomic insert library

Submitted by: Broad Institute (BI)

Study: Microtus ochrogaster Genome Sequencing

PRJNA72443 • SRP008490 • All experiments • All runs

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Microtus ochrogaster (Prairie Vole) genome sequencing using Illumina sequencing with multiple library types.

Sample: Generic sample from Microtus ochrogaster

SAMN00727831 • SRS265491 • All experiments • All runs

Organism: Microtus ochrogaster

Library:

Name: Solexa-68768

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward barcode

Group tag	Basecalls
	GCACATCT

110 reverse

Experiment attributes: (show all 7 attributes...) (hide...)

gssr_ids: 118517.0, 118518.0

lsids: broadinstitute.org:bsp.prod.sample:25J2I, broadins (show full text...)(hide...)

broadinstitute.org:bsp.prod.sample:25J2I, broadinstitute.org:bsp.prod.sample:25J2J

material_type: DNA:DNA Genomic

project: G14383

root_sample_id: SM-21CIK

sample_ids: SM-25J2I, SM-25J2J

work_request: 26118

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2011-09-01 00:58:56.0	GAPipeline	RTA1.12.4.1	Sequencer Application 1.4.5

Runs: 1 run, 28.7M spots, 6G bases, 3.7Gb

Run	# of Spots	# of Bases	Size	Published
SRR353386	28,674,311	6G	3.7Gb	2011-10-16

ID:: 117833

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