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SRX099799: 1131301810025 Toxoplasma gondii ME49 strain TGONDME49-PE-ILI9-1 Experiment
1 ILLUMINA (Illumina Genome Analyzer II) run: 31.8M spots, 3.2G bases, 2Gb downloads

Accession: SRX099799
Experiment design: Toxoplasma gondii transcriptome sequencing project
Submitted by: JCVI
Study summary: SRP006318 • Toxoplasma gondii ME49 • PRJNA28893 • All experiments  • Run Selector (more...)(less...)
Abstract: The <i>Toxoplasma gondii</i> ME49 strain, clone B7, is a clonal isolate of the type II parasites most commonly associated with AIDS. <p>The <i>T. gondii</i> ME49 whole genome shotgun project (10X coverage) has been deposited in GenBank under accession <a href="http://www.ncbi.nlm.nih.gov/sites/entrez?db=nuccore&cmd=search&term=ABPA00000000">ABPA00000000</a>. The current version (01) of the project has the accession number ABPA01000000, and consists of sequences ABPA01000001-ABPA01000705. There are currently 705 contigs in 381 scaffolds <a href= http://www.ncbi.nlm.nih.gov/sites/entrez?db=nucleotide&cmd=Search&term=DS984727%3ADS985107%5BPACC%5D">DS984727-DS985107</a>. Annotation was recently added to 122 of the 381 scaffolds.
Center Project: Toxoplasma gondii ME49
Sample: SAMN00255192 • Generic sample from Toxoplasma gondii ME49 (more...)(less...)
Library: TGONDME49-PE-ILI9-1  (more...)(less...)
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: SINGLE
Platform: Illumina  (more...)(less...)
Instrument model: Illumina Genome Analyzer II
Spot descriptor:
forward

Total: 1 run, 31.8M spots, 3.2G bases, 2Gb 
#Run# of Spots# of BasesSize
1. SRR35074631,824,2513.2G2Gb

ID:
116009

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