ZDHHC21 - SNP

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Select item 10477171.

rs1047717 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:14589175 (GRCh38)
9:14589173 (GRCh37)
Canonical SPDI:: NC_000009.12:14589174:G:A
Gene:: ZDHHC21 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.29506/20414 (ALFA)
G=0.107143/6 (Siberian)
G=0.203557/103 (SGDP_PRJ)
G=0.257415/486 (HapMap)
G=0.262492/1315 (1000Genomes)
G=0.270097/71492 (TOPMED)
G=0.277291/38803 (GnomAD)
G=0.29/174 (NorthernSweden)
G=0.298651/1151 (ALSPAC)
G=0.298751/622 (HGDP_Stanford)
G=0.3/12 (GENOME_DK)
G=0.302589/1122 (TWINSUK)
G=0.303607/303 (GoNL)
G=0.323059/5414 (TOMMO)
G=0.333333/26 (PRJEB36033)
G=0.356481/77 (Qatari)
G=0.360268/1614 (Estonian)
G=0.37372/1095 (KOREAN)
G=0.407407/88 (Vietnamese)
HGVS:: NC_000009.12:g.14589175G>A, NC_000009.11:g.14589173G>A, XR_001746285.2:n.13642C>T, XR_001746285.1:n.10741C>T, XR_001746284.2:n.10551C>T

Select item 10477182.

rs1047718 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G,T [Show Flanks]
Chromosome:: 9:14588925 (GRCh38)
9:14588923 (GRCh37)
Canonical SPDI:: NC_000009.12:14588924:A:C,NC_000009.12:14588924:A:G,NC_000009.12:14588924:A:T
Gene:: ZDHHC21 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.235791/11790 (ALFA)
T=0./0 (KOREAN)
A=0.071429/4 (Siberian)
A=0.150579/78 (SGDP_PRJ)
A=0.205671/54439 (TOPMED)
A=0.213129/29772 (GnomAD)
A=0.214241/1073 (1000Genomes)
A=0.234821/905 (ALSPAC)
A=0.235471/235 (GoNL)
A=0.236785/878 (TWINSUK)
A=0.247359/281 (Daghestan)
A=0.25/10 (GENOME_DK)
A=0.251667/151 (NorthernSweden)
A=0.299107/1340 (Estonian)
A=0.323236/5417 (TOMMO)
A=0.324074/70 (Qatari)
A=0.365385/76 (Vietnamese)
HGVS:: NC_000009.12:g.14588925A>C, NC_000009.12:g.14588925A>G, NC_000009.12:g.14588925A>T, NC_000009.11:g.14588923A>C, NC_000009.11:g.14588923A>G, NC_000009.11:g.14588923A>T, XR_001746285.2:n.13892T>G, XR_001746285.2:n.13892T>C, XR_001746285.2:n.13892T>A, XR_001746285.1:n.10991T>G, XR_001746285.1:n.10991T>C, XR_001746285.1:n.10991T>A, XR_001746284.2:n.10801T>G, XR_001746284.2:n.10801T>C, XR_001746284.2:n.10801T>A

Select item 10477203.

rs1047720 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 9:14588912 (GRCh38)
9:14588910 (GRCh37)
Canonical SPDI:: NC_000009.12:14588911:G:A,NC_000009.12:14588911:G:C
Gene:: ZDHHC21 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.288367/21229 (ALFA)
G=0.107143/6 (Siberian)
G=0.178988/92 (SGDP_PRJ)
G=0.190476/360 (HapMap)
G=0.214397/1074 (1000Genomes)
G=0.225656/59729 (TOPMED)
G=0.234999/32835 (GnomAD)
G=0.241379/14 (PRJEB36033)
G=0.253418/519 (HGDP_Stanford)
G=0.291667/175 (NorthernSweden)
G=0.298651/1151 (ALSPAC)
G=0.3/12 (GENOME_DK)
G=0.303398/1125 (TWINSUK)
G=0.303607/303 (GoNL)
G=0.323201/5417 (TOMMO)
G=0.342593/74 (Qatari)
G=0.361607/1620 (Estonian)
G=0.37372/1095 (KOREAN)
G=0.384615/80 (Vietnamese)
HGVS:: NC_000009.12:g.14588912G>A, NC_000009.12:g.14588912G>C, NC_000009.11:g.14588910G>A, NC_000009.11:g.14588910G>C, XR_001746285.2:n.13905C>T, XR_001746285.2:n.13905C>G, XR_001746285.1:n.11004C>T, XR_001746285.1:n.11004C>G, XR_001746284.2:n.10814C>T, XR_001746284.2:n.10814C>G

Select item 11129684.

rs1112968 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G,T [Show Flanks]
Chromosome:: 9:14606969 (GRCh38)
9:14606967 (GRCh37)
Canonical SPDI:: NC_000009.12:14606968:A:C,NC_000009.12:14606968:A:G,NC_000009.12:14606968:A:T
Gene:: ZDHHC21 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.402848/4300 (ALFA)
A=0.258475/122 (SGDP_PRJ)
A=0.296296/16 (Siberian)
A=0.325/13 (GENOME_DK)
A=0.378505/81 (Vietnamese)
A=0.416382/1220 (KOREAN)
A=0.420306/770 (Korea1K)
A=0.423485/2121 (1000Genomes)
A=0.441935/34775 (PAGE_STUDY)
A=0.453333/272 (NorthernSweden)
A=0.463648/122723 (TOPMED)
A=0.467638/1734 (TWINSUK)
A=0.468085/1804 (ALSPAC)
A=0.478659/157 (HapMap)
A=0.486111/105 (Qatari)
A=0.4875/2184 (Estonian)
A=0.488978/488 (GoNL)
HGVS:: NC_000009.12:g.14606969A>C, NC_000009.12:g.14606969A>G, NC_000009.12:g.14606969A>T, NC_000009.11:g.14606967A>C, NC_000009.11:g.14606967A>G, NC_000009.11:g.14606967A>T

Select item 11129695.

rs1112969 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 9:14606866 (GRCh38)
9:14606864 (GRCh37)
Canonical SPDI:: NC_000009.12:14606865:C:G,NC_000009.12:14606865:C:T
Gene:: ZDHHC21 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
G=0.000071/1 (TOMMO)
HGVS:: NC_000009.12:g.14606866C>G, NC_000009.12:g.14606866C>T, NC_000009.11:g.14606864C>G, NC_000009.11:g.14606864C>T

Select item 11140636.

rs1114063 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 9:14676478 (GRCh38)
9:14676476 (GRCh37)
Canonical SPDI:: NC_000009.12:14676477:T:A
Gene:: ZDHHC21 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.063632/1202 (ALFA)
T=0.018333/11 (NorthernSweden)
T=0.025/1 (GENOME_DK)
T=0.037037/2 (Siberian)
T=0.040723/151 (TWINSUK)
T=0.043332/167 (ALSPAC)
T=0.04509/45 (GoNL)
T=0.051829/17 (HapMap)
T=0.065887/9216 (GnomAD)
T=0.069444/15 (Qatari)
T=0.071429/320 (Estonian)
T=0.073358/19417 (TOPMED)
T=0.074818/41 (SGDP_PRJ)
T=0.078232/392 (1000Genomes)
T=0.103774/22 (Vietnamese)
T=0.11824/1982 (TOMMO)
T=0.123549/362 (KOREAN)
T=0.157751/289 (Korea1K)
HGVS:: NC_000009.12:g.14676478T>A, NC_000009.11:g.14676476T>A

Select item 11140647.

rs1114064 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:14676373 (GRCh38)
9:14676371 (GRCh37)
Canonical SPDI:: NC_000009.12:14676372:G:A
Gene:: ZDHHC21 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: A=0./0 (HapMap)
HGVS:: NC_000009.12:g.14676373G>A, NC_000009.11:g.14676371G>A

Select item 11300728.

rs1130072 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 9:14615937 (GRCh38)
9:14615935 (GRCh37)
Canonical SPDI:: NC_000009.12:14615936:T:A,NC_000009.12:14615936:T:C
Gene:: ZDHHC21 (Varview)
Functional Consequence:: 3_prime_UTR_variant,non_coding_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.496107/18732 (ALFA)
T=0.273707/127 (SGDP_PRJ)
T=0.321429/18 (Siberian)
T=0.325/13 (GENOME_DK)
T=0.365741/79 (Vietnamese)
T=0.395456/6628 (TOMMO)
T=0.42628/1249 (KOREAN)
T=0.453345/515 (Daghestan)
T=0.453779/2273 (1000Genomes)
T=0.456337/857 (HapMap)
T=0.475952/475 (GoNL)
T=0.48028/1851 (ALSPAC)
C=0.485938/2177 (Estonian)
T=0.488134/1810 (TWINSUK)
T=0.493333/296 (NorthernSweden)
C=0.49537/107 (Qatari)
T=0.496275/131359 (TOPMED)
T=0.499125/69596 (GnomAD)
HGVS:: NC_000009.12:g.14615937T>A, NC_000009.12:g.14615937T>C, NC_000009.11:g.14615935T>A, NC_000009.11:g.14615935T>C, NM_178566.6:c.*3029A>T, NM_178566.6:c.*3029A>G, NM_178566.5:c.*3029A>T, NM_178566.5:c.*3029A>G, NM_178566.4:c.*3029A>T, NM_178566.4:c.*3029A>G, XR_001746285.2:n.6990A>T, XR_001746285.2:n.6990A>G, XR_001746285.1:n.4089A>T, XR_001746285.1:n.4089A>G, XR_001746284.2:n.6990A>T, XR_001746284.2:n.6990A>G, XR_001746284.1:n.4089A>T, XR_001746284.1:n.4089A>G, NM_001354118.2:c.*3029A>T, NM_001354118.2:c.*3029A>G, NM_001354118.1:c.*3029A>T, NM_001354118.1:c.*3029A>G, NR_148718.2:n.4467A>T, NR_148718.2:n.4467A>G, NR_148718.1:n.4581A>T, NR_148718.1:n.4581A>G, NR_148715.2:n.4463A>T, NR_148715.2:n.4463A>G, NR_148715.1:n.4577A>T, NR_148715.1:n.4577A>G, XM_017014683.2:c.*3029A>T, XM_017014683.2:c.*3029A>G, XM_017014683.1:c.*3029A>T, XM_017014683.1:c.*3029A>G, NM_001354119.2:c.*3029A>T, NM_001354119.2:c.*3029A>G, NM_001354119.1:c.*3029A>T, NM_001354119.1:c.*3029A>G, NR_148716.2:n.4406A>T, NR_148716.2:n.4406A>G, NR_148716.1:n.4520A>T, NR_148716.1:n.4520A>G, NM_001354120.2:c.*3029A>T, NM_001354120.2:c.*3029A>G, NM_001354120.1:c.*3029A>T, NM_001354120.1:c.*3029A>G, NM_001354121.2:c.*3029A>T, NM_001354121.2:c.*3029A>G, NM_001354121.1:c.*3029A>T, NM_001354121.1:c.*3029A>G, NM_001354122.2:c.*3029A>T, NM_001354122.2:c.*3029A>G, NM_001354122.1:c.*3029A>T, NM_001354122.1:c.*3029A>G, NM_001354123.2:c.*3029A>T, NM_001354123.2:c.*3029A>G, NM_001354123.1:c.*3029A>T, NM_001354123.1:c.*3029A>G, NM_001354124.2:c.*3029A>T, NM_001354124.2:c.*3029A>G, NM_001354124.1:c.*3029A>T, NM_001354124.1:c.*3029A>G, NR_148717.2:n.4298A>T, NR_148717.2:n.4298A>G, NR_148717.1:n.4412A>T, NR_148717.1:n.4412A>G, NM_001354129.2:c.*3029A>T, NM_001354129.2:c.*3029A>G, NM_001354129.1:c.*3029A>T, NM_001354129.1:c.*3029A>G, NR_148714.2:n.4237A>T, NR_148714.2:n.4237A>G, NR_148714.1:n.4351A>T, NR_148714.1:n.4351A>G, NM_001354125.2:c.*3029A>T, NM_001354125.2:c.*3029A>G, NM_001354125.1:c.*3029A>T, NM_001354125.1:c.*3029A>G, NM_001354126.2:c.*3029A>T, NM_001354126.2:c.*3029A>G, NM_001354126.1:c.*3029A>T, NM_001354126.1:c.*3029A>G, NM_001354128.2:c.*3029A>T, NM_001354128.2:c.*3029A>G, NM_001354128.1:c.*3029A>T, NM_001354128.1:c.*3029A>G, NM_001354130.2:c.*3029A>T, NM_001354130.2:c.*3029A>G, NM_001354130.1:c.*3029A>T, NM_001354130.1:c.*3029A>G, NM_001354127.2:c.*3029A>T, NM_001354127.2:c.*3029A>G, NM_001354127.1:c.*3029A>T, NM_001354127.1:c.*3029A>G, XM_047423333.1:c.*3029A>T, XM_047423333.1:c.*3029A>G, XM_047423334.1:c.*3029A>T, XM_047423334.1:c.*3029A>G

Select item 11344579.

rs1134457 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 9:14605630 (GRCh38)
9:14605628 (GRCh37)
Canonical SPDI:: NC_000009.12:14605629:C:A,NC_000009.12:14605629:C:T
Gene:: ZDHHC21 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.319708/7579 (ALFA)
A=0.261092/765 (KOREAN)
A=0.263646/483 (Korea1K)
A=0.273585/58 (Vietnamese)
A=0.313866/1572 (1000Genomes)
A=0.325076/5448 (TOMMO)
A=0.333333/70 (HapMap)
A=0.355268/94036 (TOPMED)
C=0.363924/115 (SGDP_PRJ)
A=0.365741/79 (Qatari)
A=0.368333/221 (NorthernSweden)
A=0.368628/51577 (GnomAD)
A=0.382143/1712 (Estonian)
A=0.400216/1484 (TWINSUK)
A=0.40192/1549 (ALSPAC)
A=0.40481/404 (GoNL)
C=0.413043/19 (Siberian)
C=0.425/17 (GENOME_DK)
HGVS:: NC_000009.12:g.14605630C>A, NC_000009.12:g.14605630C>T, NC_000009.11:g.14605628C>A, NC_000009.11:g.14605628C>T

Select item 114302510.

rs1143025 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 9:14612190 (GRCh38)
9:14612188 (GRCh37)
Canonical SPDI:: NC_000009.12:14612189:T:G
Gene:: ZDHHC21 (Varview)
Functional Consequence:: 3_prime_UTR_variant,non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.383402/9332 (ALFA)
G=0.266355/57 (Vietnamese)
G=0.269966/791 (KOREAN)
G=0.272926/500 (Korea1K)
G=0.317146/1588 (1000Genomes)
G=0.331411/5554 (TOMMO)
G=0.335987/633 (HapMap)
G=0.356477/94356 (TOPMED)
G=0.36864/51541 (GnomAD)
T=0.371069/118 (SGDP_PRJ)
G=0.375/225 (NorthernSweden)
G=0.37963/82 (Qatari)
G=0.383036/1716 (Estonian)
G=0.404531/1500 (TWINSUK)
G=0.405553/1563 (ALSPAC)
G=0.410822/410 (GoNL)
T=0.416667/20 (Siberian)
T=0.425/17 (GENOME_DK)
HGVS:: NC_000009.12:g.14612190T>G, NC_000009.11:g.14612188T>G, NM_178566.6:c.*6776A>C, NM_178566.5:c.*6776A>C, NM_178566.4:c.*6776A>C, NM_001354118.2:c.*6776A>C, NM_001354118.1:c.*6776A>C, NR_148718.2:n.8214A>C, NR_148718.1:n.8328A>C, NR_148715.2:n.8210A>C, NR_148715.1:n.8324A>C, XM_017014683.2:c.*6776A>C, XM_017014683.1:c.*6776A>C, NM_001354119.2:c.*6776A>C, NM_001354119.1:c.*6776A>C, NR_148716.2:n.8153A>C, NR_148716.1:n.8267A>C, NM_001354120.2:c.*6776A>C, NM_001354120.1:c.*6776A>C, NM_001354121.2:c.*6776A>C, NM_001354121.1:c.*6776A>C, NM_001354122.2:c.*6776A>C, NM_001354122.1:c.*6776A>C, NM_001354123.2:c.*6776A>C, NM_001354123.1:c.*6776A>C, NM_001354124.2:c.*6776A>C, NM_001354124.1:c.*6776A>C, NR_148717.2:n.8045A>C, NR_148717.1:n.8159A>C, NM_001354129.2:c.*6776A>C, NM_001354129.1:c.*6776A>C, NR_148714.2:n.7984A>C, NR_148714.1:n.8098A>C, NM_001354125.2:c.*6776A>C, NM_001354125.1:c.*6776A>C, NM_001354126.2:c.*6776A>C, NM_001354126.1:c.*6776A>C, NM_001354128.2:c.*6776A>C, NM_001354128.1:c.*6776A>C, NM_001354130.2:c.*6776A>C, NM_001354130.1:c.*6776A>C, NM_001354127.2:c.*6776A>C, NM_001354127.1:c.*6776A>C, XM_047423333.1:c.*6776A>C, XM_047423334.1:c.*6776A>C

PubMed LitVar

Select item 134356711.

rs1343567 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:14627831 (GRCh38)
9:14627829 (GRCh37)
Canonical SPDI:: NC_000009.12:14627830:G:A
Gene:: ZDHHC21 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.074312/7633 (ALFA)
A=0.048991/102 (HGDP_Stanford)
A=0.053927/14274 (TOPMED)
A=0.056469/7909 (GnomAD)
A=0.058713/294 (1000Genomes)
A=0.060751/178 (KOREAN)
A=0.062723/281 (Estonian)
A=0.069444/15 (Qatari)
A=0.070755/15 (Vietnamese)
A=0.071237/106 (HapMap)
A=0.071429/4 (PRJEB36033)
A=0.072935/1222 (TOMMO)
A=0.08/48 (NorthernSweden)
A=0.082255/305 (TWINSUK)
A=0.08355/322 (ALSPAC)
A=0.093186/93 (GoNL)
A=0.096223/107 (Daghestan)
A=0.1/4 (GENOME_DK)
G=0.466667/28 (SGDP_PRJ)
G=0.5/4 (Siberian)
HGVS:: NC_000009.12:g.14627831G>A, NC_000009.11:g.14627829G>A

Select item 134356812.

rs1343568 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 9:14627935 (GRCh38)
9:14627933 (GRCh37)
Canonical SPDI:: NC_000009.12:14627934:A:C
Gene:: ZDHHC21 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.469349/8866 (ALFA)
A=0.269397/125 (SGDP_PRJ)
C=0.301603/301 (GoNL)
A=0.314815/17 (Siberian)
A=0.325/13 (GENOME_DK)
A=0.390084/6538 (TOMMO)
A=0.402157/2014 (1000Genomes)
A=0.411585/135 (HapMap)
A=0.423549/1241 (KOREAN)
A=0.428293/113365 (TOPMED)
A=0.436083/60885 (GnomAD)
A=0.481481/104 (Qatari)
A=0.487805/1880 (ALSPAC)
A=0.493333/296 (NorthernSweden)
A=0.495955/1839 (TWINSUK)
HGVS:: NC_000009.12:g.14627935A>C, NC_000009.11:g.14627933A>C

Select item 134356913.

rs1343569 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 9:14607105 (GRCh38)
9:14607103 (GRCh37)
Canonical SPDI:: NC_000009.12:14607104:C:A,NC_000009.12:14607104:C:T
Gene:: ZDHHC21 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.466121/12878 (ALFA)
C=0.275556/124 (SGDP_PRJ)
C=0.307692/16 (Siberian)
C=0.35/14 (GENOME_DK)
T=0.411864/243 (NorthernSweden)
T=0.422578/1823 (Estonian)
C=0.432765/1268 (KOREAN)
C=0.441758/804 (Korea1K)
C=0.45253/2266 (1000Genomes)
T=0.463928/463 (GoNL)
T=0.469525/1741 (TWINSUK)
T=0.47042/1813 (ALSPAC)
T=0.484848/160 (HapMap)
T=0.492637/130396 (TOPMED)
T=0.49537/107 (Qatari)
HGVS:: NC_000009.12:g.14607105C>A, NC_000009.12:g.14607105C>T, NC_000009.11:g.14607103C>A, NC_000009.11:g.14607103C>T

Select item 134357014.

rs1343570 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 9:14606819 (GRCh38)
9:14606817 (GRCh37)
Canonical SPDI:: NC_000009.12:14606818:A:C
Gene:: ZDHHC21 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency
MAF:: C=0./0 (HapMap)
HGVS:: NC_000009.12:g.14606819A>C, NC_000009.11:g.14606817A>C

Select item 134357115.

rs1343571 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G,T [Show Flanks]
Chromosome:: 9:14620726 (GRCh38)
9:14620724 (GRCh37)
Canonical SPDI:: NC_000009.12:14620725:A:C,NC_000009.12:14620725:A:G,NC_000009.12:14620725:A:T
Gene:: ZDHHC21 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.365758/3275 (ALFA)
G=0./0 (KOREAN)
A=0.107143/6 (Siberian)
A=0.172727/57 (HapMap)
A=0.177043/91 (SGDP_PRJ)
A=0.214553/1074 (1000Genomes)
A=0.224863/59519 (TOPMED)
A=0.266667/160 (NorthernSweden)
A=0.294499/1135 (ALSPAC)
A=0.3/12 (GENOME_DK)
A=0.303398/1125 (TWINSUK)
A=0.303607/303 (GoNL)
A=0.3163/5301 (TOMMO)
A=0.347222/75 (Qatari)
A=0.351562/1575 (Estonian)
A=0.383178/82 (Vietnamese)
A=0.391921/718 (Korea1K)
HGVS:: NC_000009.12:g.14620726A>C, NC_000009.12:g.14620726A>G, NC_000009.12:g.14620726A>T, NC_000009.11:g.14620724A>C, NC_000009.11:g.14620724A>G, NC_000009.11:g.14620724A>T, XR_002956779.2:n.2115T>G, XR_002956779.2:n.2115T>C, XR_002956779.2:n.2115T>A, XR_002956779.1:n.1974T>G, XR_002956779.1:n.1974T>C, XR_002956779.1:n.1974T>A

Select item 134357216.

rs1343572 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 9:14620927 (GRCh38)
9:14620925 (GRCh37)
Canonical SPDI:: NC_000009.12:14620926:G:A,NC_000009.12:14620926:G:C
Gene:: ZDHHC21 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.275977/4903 (ALFA)
G=0.089286/5 (Siberian)
G=0.177043/91 (SGDP_PRJ)
G=0.179878/59 (HapMap)
G=0.214085/1072 (1000Genomes)
G=0.221652/58669 (TOPMED)
G=0.229497/32113 (GnomAD)
G=0.265/159 (NorthernSweden)
G=0.28931/1115 (ALSPAC)
G=0.295591/295 (GoNL)
G=0.296656/1100 (TWINSUK)
G=0.3/12 (GENOME_DK)
G=0.316477/5304 (TOMMO)
G=0.342593/74 (Qatari)
G=0.342634/1535 (Estonian)
G=0.374744/1098 (KOREAN)
G=0.380952/80 (Vietnamese)
G=0.391376/717 (Korea1K)
HGVS:: NC_000009.12:g.14620927G>A, NC_000009.12:g.14620927G>C, NC_000009.11:g.14620925G>A, NC_000009.11:g.14620925G>C, XR_002956779.2:n.1914C>T, XR_002956779.2:n.1914C>G, XR_002956779.1:n.1773C>T, XR_002956779.1:n.1773C>G

Select item 134370517.

rs1343705 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 9:14610868 (GRCh38)
9:14610866 (GRCh37)
Canonical SPDI:: NC_000009.12:14610867:G:A,NC_000009.12:14610867:G:T
Gene:: ZDHHC21 (Varview)
Functional Consequence:: downstream_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.427331/78152 (ALFA)
G=0.208835/104 (SGDP_PRJ)
G=0.277778/15 (Siberian)
G=0.288217/543 (HapMap)
G=0.304966/1527 (1000Genomes)
G=0.325/13 (GENOME_DK)
G=0.326129/679 (HGDP_Stanford)
G=0.342008/90526 (TOPMED)
G=0.354595/49571 (GnomAD)
G=0.355581/5960 (TOMMO)
G=0.358491/76 (Vietnamese)
G=0.407104/1192 (KOREAN)
G=0.416485/763 (Korea1K)
G=0.430556/93 (Qatari)
G=0.444444/16 (PRJEB36033)
G=0.453333/272 (NorthernSweden)
G=0.45558/2041 (Estonian)
G=0.45589/1757 (ALSPAC)
G=0.459817/1705 (TWINSUK)
G=0.47996/479 (GoNL)
HGVS:: NC_000009.12:g.14610868G>A, NC_000009.12:g.14610868G>T, NC_000009.11:g.14610866G>A, NC_000009.11:g.14610866G>T

Select item 134370618.

rs1343706 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:14610593 (GRCh38)
9:14610591 (GRCh37)
Canonical SPDI:: NC_000009.12:14610592:T:C
Gene:: ZDHHC21 (Varview)
Functional Consequence:: downstream_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.394959/28238 (ALFA)
C=0.269966/791 (KOREAN)
C=0.271288/497 (Korea1K)
C=0.315428/1580 (1000Genomes)
C=0.32911/5516 (TOMMO)
C=0.336508/636 (HapMap)
C=0.349183/727 (HGDP_Stanford)
C=0.354226/93760 (TOPMED)
C=0.366819/51282 (GnomAD)
T=0.37013/114 (SGDP_PRJ)
C=0.373333/224 (NorthernSweden)
C=0.375/81 (Qatari)
C=0.383036/1716 (Estonian)
C=0.402913/1494 (TWINSUK)
C=0.403477/1555 (ALSPAC)
C=0.40982/409 (GoNL)
T=0.416667/20 (Siberian)
T=0.425/17 (GENOME_DK)
T=0.484848/32 (PRJEB36033)
HGVS:: NC_000009.12:g.14610593T>C, NC_000009.11:g.14610591T>C

Select item 141030219.

rs1410302 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:14593776 (GRCh38)
9:14593774 (GRCh37)
Canonical SPDI:: NC_000009.12:14593775:C:T
Gene:: ZDHHC21 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0./0 (HapMap)
HGVS:: NC_000009.12:g.14593776C>T, NC_000009.11:g.14593774C>T, NG_023874.1:g.299C>T

Select item 141030320.

rs1410303 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 9:14593751 (GRCh38)
9:14593749 (GRCh37)
Canonical SPDI:: NC_000009.12:14593750:C:A,NC_000009.12:14593750:C:G,NC_000009.12:14593750:C:T
Gene:: ZDHHC21 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.221362/2659 (ALFA)
G=0.277778/60 (Vietnamese)
G=0.277838/509 (Korea1K)
G=0.282253/827 (KOREAN)
G=0.29669/1486 (1000Genomes)
G=0.313757/593 (HapMap)
G=0.333065/88159 (TOPMED)
G=0.343217/48060 (GnomAD)
G=0.352077/5901 (TOMMO)
G=0.365741/79 (Qatari)
G=0.368333/221 (NorthernSweden)
C=0.372549/114 (SGDP_PRJ)
G=0.374777/1679 (Estonian)
G=0.38754/1437 (TWINSUK)
G=0.388778/388 (GoNL)
G=0.391541/1509 (ALSPAC)
C=0.4/16 (GENOME_DK)
C=0.409091/18 (Siberian)
HGVS:: NC_000009.12:g.14593751C>A, NC_000009.12:g.14593751C>G, NC_000009.12:g.14593751C>T, NC_000009.11:g.14593749C>A, NC_000009.11:g.14593749C>G, NC_000009.11:g.14593749C>T, NG_023874.1:g.274C>A, NG_023874.1:g.274C>G, NG_023874.1:g.274C>T

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