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Items: 1 to 20 of 3267

1.

rs2281069 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    A>C,G [Show Flanks]
    Chromosome:
    X:129654737 (GRCh38)
    X:128788714 (GRCh37)
    Canonical SPDI:
    NC_000023.11:129654736:A:C,NC_000023.11:129654736:A:G
    Gene:
    APLN (Varview)
    Functional Consequence:
    5_prime_UTR_variant
    Clinical significance:
    benign
    Validated:
    by frequency,by alfa,by cluster
    MAF:
    G=0.016324/267 (ALFA)
    G=0.04846/140 (ALSPAC)
    G=0.05/2 (GENOME_DK)
    G=0.06014/223 (TWINSUK)
    G=0.083333/9 (Qatari)
    G=0.160864/42579 (TOPMED)
    A=0.179487/28 (SGDP_PRJ)
    G=0.217482/821 (1000Genomes)
    G=0.318867/889 (KOREAN)
    A=0.333333/2 (Siberian)
    HGVS:
    2.

    rs3115757 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      C>A,G,T [Show Flanks]
      Chromosome:
      X:129648435 (GRCh38)
      X:128782412 (GRCh37)
      Canonical SPDI:
      NC_000023.11:129648434:C:A,NC_000023.11:129648434:C:G,NC_000023.11:129648434:C:T
      Gene:
      APLN (Varview)
      Functional Consequence:
      intron_variant
      Clinical significance:
      benign
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      G=0.169924/3147 (ALFA)
      G=0.033708/18 (MGP)
      G=0.05/2 (GENOME_DK)
      G=0.06992/202 (ALSPAC)
      G=0.081446/302 (TWINSUK)
      C=0.142857/2 (Siberian)
      C=0.144737/33 (SGDP_PRJ)
      G=0.231481/25 (Qatari)
      G=0.259644/26996 (GnomAD)
      G=0.295225/78143 (TOPMED)
      C=0.297473/871 (KOREAN)
      C=0.318828/4094 (TOMMO)
      C=0.375/18 (Vietnamese)
      G=0.416857/1574 (1000Genomes)
      C=0.484756/159 (HapMap)
      HGVS:
      3.

      rs5977126 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        G>A,C [Show Flanks]
        Chromosome:
        X:129648559 (GRCh38)
        X:128782536 (GRCh37)
        Canonical SPDI:
        NC_000023.11:129648558:G:A,NC_000023.11:129648558:G:C
        Gene:
        APLN (Varview)
        Functional Consequence:
        intron_variant
        Clinical significance:
        benign
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        A=0.022133/381 (ALFA)
        A=0.021036/78 (TWINSUK)
        A=0.021461/62 (ALSPAC)
        A=0.022472/12 (MGP)
        A=0.025/1 (GENOME_DK)
        A=0.12037/13 (Qatari)
        A=0.128932/13537 (GnomAD)
        A=0.149552/39585 (TOPMED)
        G=0.197917/19 (SGDP_PRJ)
        A=0.22872/863 (1000Genomes)
        G=0.25/1 (Siberian)
        A=0.407776/5237 (TOMMO)
        A=0.445392/1305 (KOREAN)
        A=0.458333/22 (Vietnamese)
        HGVS:
        4.

        rs5977130 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          T>C,G [Show Flanks]
          Chromosome:
          X:129654413 (GRCh38)
          X:128788390 (GRCh37)
          Canonical SPDI:
          NC_000023.11:129654412:T:C,NC_000023.11:129654412:T:G
          Gene:
          APLN (Varview)
          Functional Consequence:
          intron_variant
          Clinical significance:
          benign
          Validated:
          by frequency,by alfa,by cluster
          MAF:
          C=0.170982/3936 (ALFA)
          C=0.070613/204 (ALSPAC)
          C=0.075/3 (GENOME_DK)
          C=0.081715/303 (TWINSUK)
          T=0.109375/28 (SGDP_PRJ)
          T=0.185734/539 (KOREAN)
          T=0.2/2 (Siberian)
          T=0.208333/10 (Vietnamese)
          T=0.209453/2688 (TOMMO)
          C=0.25/27 (Qatari)
          C=0.304944/31798 (GnomAD)
          C=0.343111/90818 (TOPMED)
          C=0.482914/1823 (1000Genomes)
          HGVS:
          5.

          rs181301686 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            A>G [Show Flanks]
            Chromosome:
            X:129654944 (GRCh38)
            X:128788921 (GRCh37)
            Canonical SPDI:
            NC_000023.11:129654943:A:G
            Gene:
            APLN (Varview)
            Functional Consequence:
            5_prime_UTR_variant
            Clinical significance:
            benign
            Validated:
            by frequency,by alfa,by cluster
            MAF:
            G=0.048223/893 (ALFA)
            G=0.001042/3 (KOREAN)
            G=0.014152/53 (1000Genomes)
            G=0.027778/3 (Qatari)
            G=0.030024/7947 (TOPMED)
            G=0.036587/3835 (GnomAD)
            G=0.04846/140 (ALSPAC)
            G=0.055016/204 (TWINSUK)
            A=0.25/5 (SGDP_PRJ)
            A=0.5/1 (Siberian)
            HGVS:
            6.

            rs59690874 has merged into rs3115757 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              C>A,G,T [Show Flanks]
              Chromosome:
              X:129648435 (GRCh38)
              X:128782412 (GRCh37)
              Canonical SPDI:
              NC_000023.11:129648434:C:A,NC_000023.11:129648434:C:G,NC_000023.11:129648434:C:T
              Gene:
              APLN (Varview)
              Functional Consequence:
              intron_variant
              Clinical significance:
              benign
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              G=0.169924/3147 (ALFA)
              G=0.033708/18 (MGP)
              G=0.05/2 (GENOME_DK)
              G=0.06992/202 (ALSPAC)
              G=0.081446/302 (TWINSUK)
              C=0.142857/2 (Siberian)
              C=0.144737/33 (SGDP_PRJ)
              G=0.231481/25 (Qatari)
              G=0.259644/26996 (GnomAD)
              G=0.295225/78143 (TOPMED)
              C=0.297473/871 (KOREAN)
              C=0.318828/4094 (TOMMO)
              C=0.375/18 (Vietnamese)
              G=0.416857/1574 (1000Genomes)
              C=0.484756/159 (HapMap)
              HGVS:
              7.

              rs56926431 has merged into rs5977126 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                G>A,C [Show Flanks]
                Chromosome:
                X:129648559 (GRCh38)
                X:128782536 (GRCh37)
                Canonical SPDI:
                NC_000023.11:129648558:G:A,NC_000023.11:129648558:G:C
                Gene:
                APLN (Varview)
                Functional Consequence:
                intron_variant
                Clinical significance:
                benign
                Validated:
                by frequency,by alfa,by cluster
                MAF:
                A=0.022133/381 (ALFA)
                A=0.021036/78 (TWINSUK)
                A=0.021461/62 (ALSPAC)
                A=0.022472/12 (MGP)
                A=0.025/1 (GENOME_DK)
                A=0.12037/13 (Qatari)
                A=0.128932/13537 (GnomAD)
                A=0.149552/39585 (TOPMED)
                G=0.197917/19 (SGDP_PRJ)
                A=0.22872/863 (1000Genomes)
                G=0.25/1 (Siberian)
                A=0.407776/5237 (TOMMO)
                A=0.445392/1305 (KOREAN)
                A=0.458333/22 (Vietnamese)
                HGVS:
                8.

                rs7054789 has merged into rs5977126 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  G>A,C [Show Flanks]
                  Chromosome:
                  X:129648559 (GRCh38)
                  X:128782536 (GRCh37)
                  Canonical SPDI:
                  NC_000023.11:129648558:G:A,NC_000023.11:129648558:G:C
                  Gene:
                  APLN (Varview)
                  Functional Consequence:
                  intron_variant
                  Clinical significance:
                  benign
                  Validated:
                  by frequency,by alfa,by cluster
                  MAF:
                  A=0.022133/381 (ALFA)
                  A=0.021036/78 (TWINSUK)
                  A=0.021461/62 (ALSPAC)
                  A=0.022472/12 (MGP)
                  A=0.025/1 (GENOME_DK)
                  A=0.12037/13 (Qatari)
                  A=0.128932/13537 (GnomAD)
                  A=0.149552/39585 (TOPMED)
                  G=0.197917/19 (SGDP_PRJ)
                  A=0.22872/863 (1000Genomes)
                  G=0.25/1 (Siberian)
                  A=0.407776/5237 (TOMMO)
                  A=0.445392/1305 (KOREAN)
                  A=0.458333/22 (Vietnamese)
                  HGVS:
                  9.

                  rs58497870 has merged into rs5977130 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    T>C,G [Show Flanks]
                    Chromosome:
                    X:129654413 (GRCh38)
                    X:128788390 (GRCh37)
                    Canonical SPDI:
                    NC_000023.11:129654412:T:C,NC_000023.11:129654412:T:G
                    Gene:
                    APLN (Varview)
                    Functional Consequence:
                    intron_variant
                    Clinical significance:
                    benign
                    Validated:
                    by frequency,by alfa,by cluster
                    MAF:
                    C=0.170982/3936 (ALFA)
                    C=0.070613/204 (ALSPAC)
                    C=0.075/3 (GENOME_DK)
                    C=0.081715/303 (TWINSUK)
                    T=0.109375/28 (SGDP_PRJ)
                    T=0.185734/539 (KOREAN)
                    T=0.2/2 (Siberian)
                    T=0.208333/10 (Vietnamese)
                    T=0.209453/2688 (TOMMO)
                    C=0.25/27 (Qatari)
                    C=0.304944/31798 (GnomAD)
                    C=0.343111/90818 (TOPMED)
                    C=0.482914/1823 (1000Genomes)
                    HGVS:
                    10.

                    rs734975 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      C>T [Show Flanks]
                      Chromosome:
                      X:129649907 (GRCh38)
                      X:128783884 (GRCh37)
                      Canonical SPDI:
                      NC_000023.11:129649906:C:T
                      Gene:
                      APLN (Varview)
                      Functional Consequence:
                      intron_variant
                      Validated:
                      by frequency,by alfa,by cluster
                      MAF:
                      T=0.026728/495 (ALFA)
                      T=0.00027/1 (TWINSUK)
                      T=0.001038/3 (ALSPAC)
                      T=0.037037/4 (Qatari)
                      C=0.038462/1 (SGDP_PRJ)
                      T=0.045337/4683 (GnomAD)
                      T=0.05231/13846 (TOPMED)
                      T=0.057856/218 (1000Genomes)
                      T=0.07622/25 (HapMap)
                      T=0.093643/274 (KOREAN)
                      T=0.094722/1216 (TOMMO)
                      T=0.145833/7 (Vietnamese)
                      C=0.166667/1 (Siberian)
                      HGVS:
                      11.

                      rs909656 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        G>A,T [Show Flanks]
                        Chromosome:
                        X:129648585 (GRCh38)
                        X:128782562 (GRCh37)
                        Canonical SPDI:
                        NC_000023.11:129648584:G:A,NC_000023.11:129648584:G:T
                        Gene:
                        APLN (Varview)
                        Functional Consequence:
                        intron_variant
                        Validated:
                        by frequency,by alfa,by cluster
                        MAF:
                        T=0.002385/74 (ALFA)
                        T=0.000346/1 (ALSPAC)
                        T=0.000539/2 (TWINSUK)
                        T=0.001873/1 (MGP)
                        T=0.003027/30 (GoESP)
                        T=0.006872/724 (GnomAD)
                        T=0.009259/1 (Qatari)
                        T=0.013599/1876 (GnomAD_exomes)
                        T=0.019979/75 (1000Genomes)
                        T=0.030997/46 (HapMap)
                        T=0.0625/3 (Vietnamese)
                        G=0.083333/1 (SGDP_PRJ)
                        T=0.092026/1182 (TOMMO)
                        T=0.093985/275 (KOREAN)
                        G=0.166667/1 (Siberian)
                        HGVS:
                        12.

                        rs909657 [Homo sapiens]
                          Variant type:
                          SNV
                          Alleles:
                          A>C,G [Show Flanks]
                          Chromosome:
                          X:129649590 (GRCh38)
                          X:128783567 (GRCh37)
                          Canonical SPDI:
                          NC_000023.11:129649589:A:C,NC_000023.11:129649589:A:G
                          Gene:
                          APLN (Varview)
                          Functional Consequence:
                          intron_variant
                          Validated:
                          by frequency,by alfa,by cluster
                          MAF:
                          G=0.150266/9220 (ALFA)
                          G=0.070267/203 (ALSPAC)
                          G=0.075/3 (GENOME_DK)
                          G=0.081715/303 (TWINSUK)
                          A=0.125/30 (SGDP_PRJ)
                          A=0.166667/2 (Siberian)
                          G=0.259259/28 (Qatari)
                          A=0.297611/872 (KOREAN)
                          G=0.309546/31874 (GnomAD)
                          A=0.3125/15 (Vietnamese)
                          A=0.318544/4091 (TOMMO)
                          G=0.349737/92572 (TOPMED)
                          A=0.446105/836 (HapMap)
                          G=0.472216/1783 (1000Genomes)
                          HGVS:
                          13.

                          rs2142779 [Homo sapiens]
                            Variant type:
                            SNV
                            Alleles:
                            A>C,G,T [Show Flanks]
                            Chromosome:
                            X:129656755 (GRCh38)
                            X:128790732 (GRCh37)
                            Canonical SPDI:
                            NC_000023.11:129656754:A:C,NC_000023.11:129656754:A:G,NC_000023.11:129656754:A:T
                            Gene:
                            APLN (Varview)
                            Functional Consequence:
                            upstream_transcript_variant,2KB_upstream_variant
                            Validated:
                            by frequency,by alfa,by cluster
                            MAF:
                            A=0.055202/953 (ALFA)
                            T=0./0 (KOREAN)
                            A=0./0 (Vietnamese)
                            A=0.000723/9 (TOMMO)
                            A=0.001799/1 (SGDP_PRJ)
                            A=0.023517/89 (1000Genomes)
                            A=0.027778/3 (Qatari)
                            A=0.045948/12162 (TOPMED)
                            A=0.05/2 (GENOME_DK)
                            A=0.05/2 (Siberian)
                            A=0.075459/218 (ALSPAC)
                            A=0.0774/287 (TWINSUK)
                            HGVS:
                            14.

                            rs2235306 [Homo sapiens]
                              Variant type:
                              SNV
                              Alleles:
                              T>C [Show Flanks]
                              Chromosome:
                              X:129650121 (GRCh38)
                              X:128784098 (GRCh37)
                              Canonical SPDI:
                              NC_000023.11:129650120:T:C
                              Gene:
                              APLN (Varview)
                              Functional Consequence:
                              intron_variant
                              Validated:
                              by frequency,by alfa,by cluster
                              MAF:
                              C=0.05416/3321 (ALFA)
                              C=0.021036/78 (TWINSUK)
                              C=0.021461/62 (ALSPAC)
                              C=0.023256/2 (PRJEB36033)
                              C=0.025/1 (GENOME_DK)
                              C=0.12037/13 (Qatari)
                              C=0.122938/12605 (GnomAD)
                              C=0.145128/38414 (TOPMED)
                              C=0.171305/357 (HGDP_Stanford)
                              T=0.193878/19 (SGDP_PRJ)
                              C=0.226223/854 (1000Genomes)
                              C=0.268332/505 (HapMap)
                              C=0.410764/5275 (TOMMO)
                              C=0.446721/1308 (KOREAN)
                              C=0.458333/22 (Vietnamese)
                              T=0.5/1 (Siberian)
                              HGVS:
                              15.

                              rs2235307 [Homo sapiens]
                                Variant type:
                                SNV
                                Alleles:
                                C>A,T [Show Flanks]
                                Chromosome:
                                X:129650855 (GRCh38)
                                X:128784832 (GRCh37)
                                Canonical SPDI:
                                NC_000023.11:129650854:C:A,NC_000023.11:129650854:C:T
                                Gene:
                                APLN (Varview)
                                Functional Consequence:
                                intron_variant
                                Validated:
                                by frequency,by alfa,by cluster
                                MAF:
                                T=0.048108/4817 (ALFA)
                                C=0./0 (Siberian)
                                T=0.047421/137 (ALSPAC)
                                T=0.05/2 (GENOME_DK)
                                T=0.06014/223 (TWINSUK)
                                T=0.074074/8 (Qatari)
                                T=0.107486/224 (HGDP_Stanford)
                                T=0.130435/6 (PRJEB36033)
                                T=0.136524/515 (1000Genomes)
                                T=0.161433/473 (KOREAN)
                                T=0.163728/260 (HapMap)
                                T=0.166667/8 (Vietnamese)
                                T=0.176447/2266 (TOMMO)
                                C=0.194444/21 (SGDP_PRJ)
                                HGVS:
                                16.

                                rs2235308 [Homo sapiens]
                                  Variant type:
                                  SNV
                                  Alleles:
                                  A>C,G,T [Show Flanks]
                                  Chromosome:
                                  X:129651235 (GRCh38)
                                  X:128785212 (GRCh37)
                                  Canonical SPDI:
                                  NC_000023.11:129651234:A:C,NC_000023.11:129651234:A:G,NC_000023.11:129651234:A:T
                                  Gene:
                                  APLN (Varview)
                                  Functional Consequence:
                                  intron_variant
                                  Validated:
                                  by frequency,by alfa,by cluster
                                  MAF:
                                  G=0.196133/3632 (ALFA)
                                  T=0./0 (KOREAN)
                                  G=0.06992/202 (ALSPAC)
                                  G=0.075/3 (GENOME_DK)
                                  G=0.081446/302 (TWINSUK)
                                  A=0.125/30 (SGDP_PRJ)
                                  A=0.2/2 (Siberian)
                                  G=0.259259/28 (Qatari)
                                  G=0.308061/31457 (GnomAD)
                                  A=0.318032/4084 (TOMMO)
                                  G=0.349583/92531 (TOPMED)
                                  A=0.426829/140 (HapMap)
                                  G=0.472216/1783 (1000Genomes)
                                  HGVS:
                                  17.

                                  rs2235309 [Homo sapiens]
                                    Variant type:
                                    SNV
                                    Alleles:
                                    C>G,T [Show Flanks]
                                    Chromosome:
                                    X:129651324 (GRCh38)
                                    X:128785301 (GRCh37)
                                    Canonical SPDI:
                                    NC_000023.11:129651323:C:G,NC_000023.11:129651323:C:T
                                    Gene:
                                    APLN (Varview)
                                    Functional Consequence:
                                    intron_variant
                                    Validated:
                                    by frequency,by alfa,by cluster
                                    MAF:
                                    T=0.079644/1475 (ALFA)
                                    T=0.021036/78 (TWINSUK)
                                    T=0.021461/62 (ALSPAC)
                                    T=0.025/1 (GENOME_DK)
                                    T=0.12037/13 (Qatari)
                                    T=0.128124/13088 (GnomAD)
                                    T=0.152012/40236 (TOPMED)
                                    C=0.185185/20 (SGDP_PRJ)
                                    T=0.231426/874 (1000Genomes)
                                    C=0.25/1 (Siberian)
                                    T=0.279503/90 (HapMap)
                                    T=0.408352/5244 (TOMMO)
                                    T=0.4375/21 (Vietnamese)
                                    T=0.446721/1308 (KOREAN)
                                    HGVS:
                                    18.

                                    rs2235310 [Homo sapiens]
                                      Variant type:
                                      SNV
                                      Alleles:
                                      T>C [Show Flanks]
                                      Chromosome:
                                      X:129652326 (GRCh38)
                                      X:128786303 (GRCh37)
                                      Canonical SPDI:
                                      NC_000023.11:129652325:T:C
                                      Gene:
                                      APLN (Varview)
                                      Functional Consequence:
                                      intron_variant
                                      Validated:
                                      by frequency,by alfa,by cluster
                                      MAF:
                                      C=0.08342/1600 (ALFA)
                                      C=0.001873/1 (MGP)
                                      C=0.021036/78 (TWINSUK)
                                      C=0.021461/62 (ALSPAC)
                                      C=0.025/1 (GENOME_DK)
                                      C=0.12037/13 (Qatari)
                                      C=0.126015/12770 (GnomAD)
                                      C=0.146133/38680 (TOPMED)
                                      T=0.204082/20 (SGDP_PRJ)
                                      C=0.226847/856 (1000Genomes)
                                      T=0.25/1 (Siberian)
                                      C=0.280488/92 (HapMap)
                                      C=0.413393/5309 (TOMMO)
                                      C=0.448016/1310 (KOREAN)
                                      C=0.458333/22 (Vietnamese)
                                      HGVS:
                                      19.

                                      rs2235311 [Homo sapiens]
                                        Variant type:
                                        SNV
                                        Alleles:
                                        G>A [Show Flanks]
                                        Chromosome:
                                        X:129652697 (GRCh38)
                                        X:128786674 (GRCh37)
                                        Canonical SPDI:
                                        NC_000023.11:129652696:G:A
                                        Gene:
                                        APLN (Varview)
                                        Functional Consequence:
                                        intron_variant
                                        Validated:
                                        by frequency,by alfa,by cluster
                                        MAF:
                                        A=0./0 (ALFA)
                                        A=0./0 (HapMap)
                                        A=0.000029/3 (GnomAD)
                                        A=0.000079/21 (TOPMED)
                                        A=0.000832/3 (1000Genomes)
                                        A=0.006849/20 (KOREAN)
                                        A=0.019169/246 (TOMMO)
                                        HGVS:
                                        20.

                                        rs2235312 [Homo sapiens]
                                          Variant type:
                                          SNV
                                          Alleles:
                                          A>G [Show Flanks]
                                          Chromosome:
                                          X:129653118 (GRCh38)
                                          X:128787095 (GRCh37)
                                          Canonical SPDI:
                                          NC_000023.11:129653117:A:G
                                          Gene:
                                          APLN (Varview)
                                          Functional Consequence:
                                          intron_variant
                                          Validated:
                                          by frequency,by alfa,by cluster
                                          MAF:
                                          G=0.12194/20326 (ALFA)
                                          G=0.03125/2 (PRJEB36033)
                                          G=0.069574/201 (ALSPAC)
                                          G=0.075/3 (GENOME_DK)
                                          G=0.081715/303 (TWINSUK)
                                          A=0.125/30 (SGDP_PRJ)
                                          A=0.142857/2 (Siberian)
                                          G=0.259259/28 (Qatari)
                                          A=0.297676/871 (KOREAN)
                                          G=0.310761/32215 (GnomAD)
                                          A=0.318468/4089 (TOMMO)
                                          G=0.347889/725 (HGDP_Stanford)
                                          G=0.34962/92541 (TOPMED)
                                          A=0.354167/17 (Vietnamese)
                                          A=0.445917/841 (HapMap)
                                          G=0.472841/1785 (1000Genomes)
                                          HGVS:

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